Conserved Protein Domain Family
Phage_RpbA

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pfam10789: Phage_RpbA 
Phage RNA polymerase binding, RpbA
Upon infection the RpbA encode phage protein binds to the ADP-ribosylated core RNA polymerase and modulates function to preferentially bind T4 promoters. This is a non-essential protein to the phage life cycle.
Statistics
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Aligned: 8 rows
Threshold Bit Score: 110.627
Threshold Setting Gi: 75083389
Created: 2-May-2019
Updated: 18-Jul-2019
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q5QC26    11 KDIQVKtIRTDSNphnqNRIRKSWVLNIDTNSARRLQSLPQE--TKFMLYGIIDNDVSDKWVEIMRRHYNDSLAAGAKLV 88  Escherichia phage JS98
Q6J2Q2    14 QDIQGK-ISDSAD----TKIRKAWVLQTPDTLREMYQAMPLE--SRRALYKSLDKEVLELWISKMRQHREDALANGVKMI 86  Acinetobacter virus...
Q06ES4    13 KDIQPKhVRSESNpqnqNKIRRAWVLSLSDNAMEVIQNKIKSapARHAYYEAIDREVSNKWIELMRKHTTESLNAGAKVL 92  Escherichia virus RB32
Q7Y580    11 ADLKVTsIRTDANphnhNRVRKAWVLHCDDASAKKLQSLPQE--TRFMIYGFIDNDVSDMWIHLMRKHYKDSIEAGGKIV 88  Enterobacteria phag...
ACL77983  13 ADIQNKkTSLEFDra-mNKIRKAWVLQMPESEKAKMKVIPQQ--ARFELYAHIDDMVQKEWIAAMRKYYDDSIAKGAKTI 89  Escherichia phage JSE
Q76Z69     7 GDSLKT---LSAAyfyqNLARKNWVCLMTQEEYDRLQCLERD--VRFDVYKEFDDDVIETAIRLSQKFRAENLNCKREFV 81  Aeromonas virus Aeh1
Q56EX1    11 ADIRPL---SDNIyetsVKIRKAWVANISDVRANQLQAIEQS--VRFELYAEIDNLVRDMYVDLLQRRRAMILANGGYHV 85  Aeromonas virus 31
Q7Y5F2    11 ADIRPM---SDNVfensVKIRKAWVSFISDIRANQLQALEQK--IRFELYAEIDKMVRDTYIDLLVRRRESILVNGGYHV 85  Aeromonas virus 25
Q5QC26    89 IDRdGSERLEDDYCVDPDEQLLEAGAIV----ASQI 120 Escherichia phage JS98
Q6J2Q2    87 RVN-GFYRLPDEYCDQQDQMLIDAALEV----IQLS 117 Acinetobacter virus 133
Q06ES4    93 MAH-GHERLEDDYCGNADERLIVAAQIVaetiAADF 127 Escherichia virus RB32
Q7Y580    89 LDKdGSERLEDFYCVDADEQLIAAGEIV----ASKI 120 Enterobacteria phage RB69
ACL77983  90 R---GKDILEKGYQIDTDELLIEAASVV----VTRL 118 Escherichia phage JSE
Q76Z69    82 ------------------EFFPDAAILV----YSEW 95  Aeromonas virus Aeh1
Q56EX1    86 KGMnDKPVFAKQFQYDTDELIITAAEMV----MADY 117 Aeromonas virus 31
Q7Y5F2    86 KGMnDKKVLAKQFQYDTDELIIQAAQTV----MADY 117 Aeromonas virus 25
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