4BJJ


Conserved Protein Domain Family
TFIIIC_sub6

?
pfam10419: TFIIIC_sub6 
Click on image for an interactive view with Cn3D
TFIIIC subunit
This is a family of proteins subunits of TFIIIC. TFIIIC in yeast and humans is required for transcription of tRNA and 5 S RNA genes by RNA polymerase III. Yeast members of this family are fused to phosphoglycerate mutase domain.
Statistics
?
Aligned: 98 rows
Threshold Bit Score: 44.9095
Threshold Setting Gi: 326509181
Created: 2-May-2019
Updated: 18-Jul-2019
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
4BJJ_B        23 NSSldfQSSDDFSILGIDQPHPIVRIGGMF-FRGTWHQPIGTDIVVPSVND-------------------------SEL- 75  fission yeast
Q8T1F9       143 PGY---LLNKDYSLIGLETPNPILKIGDTF-YKGNFEETFGTQLFFRTVTKannnnnntsqasqvnnennknkndsnidd 218 Dictyostelium d...
EFX73733      26 alN---QENVSIKVLGMETDEPIIKIGNQL-YEGKYYDTIGTELFFTEAEGeppsd----------------tlfdTKL- 84  common water flea
EFH65534      14 lrhidiPSDAPYTLSGLDTLNPVLTIDDKIkLVGEYIETIGTCLAFSDk---------------------------CEN- 65  Arabidopsis lyr...
ERM93907      24 sirpniPANASYTLSGLNTMNPVLTIGGKLkLIGEWQETIGTFFVFSEsdestpvmheetgpsetnmfkgkcivesDEK- 102 Amborella trich...
CBI20330      34 rgqvdiPPNAPYVLSGLDTPNPILVIGDSLkLIGEYEETIGTCLVFSEgqatpvvheetgps-eanlfsgtfiidpNQA- 111 wine grape
XP_021205178  41 vnI---EKYRNIHILGIDSKNPIVQMDDTF-YIGKYDNPFGTYLFFEEDPSpntdd----------------plfdRLS- 99  domestic silkworm
PNT59318      28 faqvdiTPNTPYVLSGLDTPEPIMIIDDKVkLIGKYEDTIGTCFVFSE-------------------------------- 75  black cottonwood
XP_018676353 111 cvradiPANAPYVLSGLDTVKPVLVIGD-LkLIGEYQETMGTCYIFSEgdgaptvtcsetkpsetnvfkdkqfldpKQA- 188 wild Malaysian ...
BAJ86983       1 -------mfffnVFQGLDTLTPNLIVGDGVkMIGEYEGTVGTYYLFSEndaspnpvhdhte--ppkvnqdklgstnKEG- 70  domesticated ba...
4BJJ_B        76 ---------SR---DGLVLCKRRLMLEQIRLV 95  fission yeast
Q8T1F9       219 kpkddqdsmeiensQSVDKNNQTLDKEKEKEK 250 Dictyostelium discoideum
EFX73733      85 ---------EKk-lEFYGKTNTKLVVSRAFAK 106 common water flea
EFH65534      66 ---------QTpqkKTVAKLHKILKFRLAPLD 88  Arabidopsis lyrata subsp. lyrata
ERM93907     103 ---------PRkqiKSVCNLQKVLKFRLPSNK 125 Amborella trichopoda
CBI20330     112 ---------PAkevKPIASLQKILRFRLLHEG 134 wine grape
XP_021205178 100 ---------EKn-lKYVCKTRKCIQMQHAYVs 121 domestic silkworm
PNT59318      76 -------------------NGELFSIRHLWFK 88  black cottonwood
XP_018676353 189 ---------PSkqvKPIASLHKILKFKLVSED 211 wild Malaysian banana
BAJ86983      71 ---------PSkevKHLASVQKILKFRSINED 93  domesticated barley
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap