4YIR


Conserved Protein Domain Family
BHD_1

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pfam10403: BHD_1 
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Rad4 beta-hairpin domain 1
This short domain is found in the Rad4 protein. This domain binds to DNA.
Statistics
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PSSM-Id: 337734
View PSSM: pfam10403
Aligned: 175 rows
Threshold Bit Score: 40.1634
Threshold Setting Gi: 410084270
Created: 28-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
4YIR_A       337 SEGIPDSVQDLKNHPYYVLEQDIKQTQIVKPG--CkE-----CGYLkvhgk--vgkvLKVYAKRDI 393
gi 74600483  423 NYNIPSNFSSMKRNPNLVTRSTLRYNEFIEPN--TnP-----ICTVmidk---kflkEPVFFKNSI 478
gi 74589418  389 NYTIPETFTAMKNSPNFITPSTLRYNEVIMPD--TkP-----VKRIkin-----nkkEPVYFKNSl 442
gi 149237348 465 NFKVPETFSAMKKSPNFTTESTLRYNEVIVPG--SkK-----VSTVrld-----gkkKAVYFRNDV 518
gi 255721235 273 NYTIPSTFSAMKSSPNFITPSTLRYNEVIISG--TtP-----VKKVrlr-----dkkEPVYFKNSI 326
gi 354547824 397 NYTIPKTLSAMKRSPNFTTKSTLRYNEIIGPGphApP-----IAKVvng------ekRHVYFKNCl 451
gi 403214142 429 NFNPPLNVKDMYTSESFAIKSFLRANEVIDPS--AkPvfiwkCGKFn----------EPVYWKGDI 482
gi 575515001 397 NYDIPQTRAAIKRSANFVTHASLRYDEVIDKD--TkP-----IIRVkid-----gkrVPVFLRNSV 450
gi 150865311 327 NYNIPTTWSALKRNPNLVTESTLRYNEVIESS--SvP-----LSSIsld-----nkkESIYFKNHV 380
gi 146415692 399 NYSIPTSYAAMKRSPNFITRKTLRFNEEISPT--AkP-----VGTIklqskkaieekQKVYSRSSV 457
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