Conserved Protein Domain Family
Atx10homo_assoc

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pfam09759: Atx10homo_assoc 
Spinocerebellar ataxia type 10 protein domain
This is the conserved C-terminal 100 residues of Ataxin-10. Ataxin-10 belongs to the family of armadillo repeat proteins and in solution it tends to form homotrimeric complexes, which associate via a tip-to-tip association in a horseshoe-shaped contact with the concave sides of the molecules facing each other. This domain may represent the homo-association site since that is located near the C-terminus of Ataxin-10. The protein does not contain a signal sequence for secretion or any subcellular compartment confirming its cytoplasmic localization, specifically to the olivocerebellar region.
Statistics
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PSSM-Id: 462885
Aligned: 80 rows
Threshold Bit Score: 106.395
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EHY59918      817 LKKLIVLVLSSLVWKSRTVQDQIRQYGG-VETILSCTQYDACNPYIKEHAVMCLKFLLEDNRENQALVSSLEAREV-Rte 894 
Q57UY3        197 FRREHVRLVANLTYENKEVCSAVLGDTRlLTAILGATRIDLENPGMGEWATFVIRNLCYCSNEAREILRGLTPISIvE-- 274  Trypanosoma b...
Q4CUL6        198 YRTEHMRLMANLTLDNVEACSFIVSNSAlLAAVLTSTRFDEENPGMVEWAEFCIRNLCCCTKEAHEKIRRLMPVGIsD-- 275  Trypanosoma c...
Q4QH91        199 FKTECMRLIANLTHNNVDVNAALVERDTfLFNILSATQIDEENPGMVEWAEFALRNICESSAAAREKIRKLAPQGVtD-- 276  Leishmania major
ESN96621      435 VKRNALSLVANITFKNKTLQDLLRGKGG-IEAILNMTAIDKFCPTNQQWALLAIHSLCVGNPENQEYISKLKVERVsE-- 511 
XP_005844246   38 FRTDLLAAVANATYGRPAVQSEVCALGG-VELVLAQCQLDRHSPLAREWALWGVRNLCEGNAQAQEAIRQLQLCTT-V-- 113 
XP_003062424  541 YRVDALAPLANAMFNRPGVCDQVVKLGG-VPIILAATRGEDGEDFLREWALWATRNLCHGSEDARKEIESMQPEAA-A-- 616 
XP_002501343  540 YRVDCVAPLANAMFARPLVCNQVAKLGG-VAIVLAATRGEDGDDYLREWALWGVRNLCAGSDVARGEIERMQPQAA-A-- 615 
XP_003291055  485 FKKEIIRILGNLAHKNFNNQNEIRELGG-IELILNHCRFDIKNPYIKEWSVFAIRNLCEENQENQNVINNLKMEGI-A-- 560 
Q55EI6        500 FKIELIRILGNLSYKNRGNQDEIRELGG-IEIILNHCRFDVNNPYIKEWSVFAIRNLCEDNVENQNLIESLKVKGV-A-- 575  Dictyostelium...
EHY59918      895 paLREKLDNM-GIKVELGPD-GKPKLS 919 
Q57UY3        275 --EADELFGK-AVDPHATPE-GRSAME 297  Trypanosoma brucei
Q4CUL6        276 --ESKELLSSgRVDCHLNSE-GKLVLS 299  Trypanosoma cruzi
Q4QH91        277 --QSREILAG-RCSYSFSST-GKVQLH 299  Leishmania major
ESN96621      512 --LNNDLRSV-GVNVKVVD--GRLRFE 533 
XP_005844246  114 --DNEELKRM-GVRMELDEHsGKLRVI 137 
XP_003062424  617 --DSQELAAM-GLNVSVDPAtGKVRVK 640 
XP_002501343  616 --DSQQLAAM-GLNVEVDPGtGRVRVG 639 
XP_003291055  561 --NQKELNDL-GIEVGV-EN-GAVKFK 582 
Q55EI6        576 --NNDELKDL-GLEVGVTEN-GTIKFK 598  Dictyostelium discoideum
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