5A5T


Conserved Protein Domain Family
eIF3_N

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pfam09440: eIF3_N 
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eIF3 subunit 6 N terminal domain
This is the N terminal domain of subunit 6 translation initiation factor eIF3.
Statistics
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PSSM-Id: 337415
View PSSM: pfam09440
Aligned: 114 rows
Threshold Bit Score: 53.2959
Threshold Setting Gi: 71424007
Created: 27-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5A5T_E         5 DLTTRIAHFLDRHLVFPLLEFlsv---------keiYNEkellqg--kldllSDTNMVDFAMDVYKNlysd--diphALR 71  Sumatran orangutan
Q383C1         3 EMLSCLVPYLDKHLVLGLLYF---------------YDD-------------QGVDVGDALRFVQATt---------ALT 45  Trypanosoma brucei
EJK47011     251 DLTSQISPYLDLHMMFPLLEYidslis----sgaisYNSldvaqa--rlellKPTHMVDYAMDIYREvhgeeapipqEME 324 Thalassiosira o...
XP_002181668  13 DLTSQISPFLDRHMIFPLLEYldtlikdqdgkhlvdYNPqdvaaa--rleilRPTHMVDYAIDVHQTlhpgq-pvpdEME 89  Phaeodactylum t...
EUB62274       5 DLTKTISRYLDRHLVVPLLEYlsv---------ksiYDGdsilrs--kldllMETSMVDFTCLTYKLlhnvd-dvpeELI 72  Echinococcus gr...
XP_002287841  18 DLTSLISPYLDLHMMFPLLEYidslis----tgsvsYSSsdvaqa--rlkllKPTHMVDYAMDIYREvhgenaeipkDME 91  Thalassiosira p...
XP_018647191   5 DLTKKISGFLDKHLTLPLLEYisv---------kniYDEksilkt--kwevlLETSMVDYAADTYRSiydt--eppkGLL 71  Schistosoma man...
CBY10095      14 DLTSKLGRSLDPHMLLMMLEShssg-------tiaiFDRtsimra-kadlleKNTKMIDYLKEVREEigd----atdKYD 81  Oikopleura dioica
XP_812647      3 EMLRCLLPHLDKHLALGLLYF---------------YDE-------------QGLDVADALRAVQATt---------ALT 45  Trypanosoma cru...
XP_001470274   2 DMLTKLLPYMDKHLALGLLNH---------------YAQngedvqdammkliETTGLna----------------dgSIK 50  Leishmania infa...
5A5T_E        72 EKRTTVVAQLKQLQAE---TEPIVKMF-EDP---ETTRQ-------Mqs---trDGRM--LFD-YLA--D--KhGFRQEY 127 Sumatran orangutan
Q383C1        46 PEGEVSLEQENKIRETaerARPALDMFfEQN---VSDNCtyqlcltEsridelrGKGE--LSRgFLE--K--E-GITPKV 115 Trypanosoma brucei
EJK47011     325 DQKAGVFKELEELREG---QASVDDLC-RNE---ELRAT-------Lv-----sNNQW--NVK-SLTsmQ--EfGITPEA 380 Thalassiosira o...
XP_002181668  90 AQKKTVYEELEALRAA---CGAFDKLC-QDE---TERSK-------Lm-----aTGQW--NFG-SLN--Q--ShQITPEM 143 Phaeodactylum t...
EUB62274      73 KKRQDTLDLIRVMEEK---MAPIDKIF-S-T---ETMKE-------Mv-----qCKVAkeLFQ-NLE--A--KyGFKPDM 127 Echinococcus gr...
XP_002287841  92 DQKVEVFRELEELREG---QMKLDELF-RNE---EVRAN-------Lv-----qNNQW--NVK-SLI--AatSyGITSDT 147 Thalassiosira p...
XP_018647191  72 DKREKVLESIQETEVK---LKPVKVIF-SQEtmkEVAQCk--------------NAKD--LLA-SLE--T--KyNFKTEM 126 Schistosoma man...
CBY10095      82 AQKDEVIKELRTQSEF---FEKLTDLF-SDP---EFQAQ-------Trt---mrASSQ--VLE-LLI--S--ThGYEESI 137 Oikopleura dioica
XP_812647     46 AEGEVSVEQERKIKETaqrARPALDEFfEKS---ETENStyqfkltGseidalrSNRE--LSRdVLE--A--K-GITSNV 115 Trypanosoma cru...
XP_001470274  51 TETEEMMAKATAA------AQPALKEFfDES---EDDHStyqfkltEteigerrTQGE--LSHeFLS--E--KkGITAAV 115 Leishmania infa...
5A5T_E       128 LDTLYRYAK 136 Sumatran orangutan
Q383C1       116 MTAVMDLAF 124 Trypanosoma brucei
EJK47011     381 ISTYYKFAK 389 Thalassiosira oceanica
XP_002181668 144 VEAYRKLAR 152 Phaeodactylum tricornutum CCAP 1055/1
EUB62274     128 LDDMFEAAR 136 Echinococcus granulosus
XP_002287841 148 IAAYYKFAK 156 Thalassiosira pseudonana CCMP1335
XP_018647191 127 LNDMFDAAR 135 Schistosoma mansoni
CBY10095     138 VDDIYKYAK 146 Oikopleura dioica
XP_812647    116 MKAVMELAY 124 Trypanosoma cruzi strain CL Brener
XP_001470274 116 MNALYKLAY 124 Leishmania infantum JPCM5
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