2OQM


Conserved Protein Domain Family
DUF1993

?
pfam09351: DUF1993 
Click on image for an interactive view with Cn3D
Domain of unknown function (DUF1993)
This family of proteins are functionally uncharacterized.
Statistics
?
Aligned: 216 rows
Threshold Bit Score: 125.681
Threshold Setting Gi: 482809390
Created: 3-May-2019
Updated: 18-Jul-2019
Structure
?
Program:
Drawing:
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
2OQM_A              21 LYDLTVVQFSKXLKNLNAIFDKA-EAFAELK-KVD--XDV-LLNSRLAADQFNLIRQVQIACDTAKVGVARL---TGQle 92  Shewanell...
CBX93585             9 FYGTTIPALKKVTQSAISILTSA-KTELSTAaNGTlpTELeVLDSHFG-TMLPFRMQPIFMAKFASLALDDTkltGSV-- 84  Leptospha...
EMD85950             7 FYDATVPVMCGISKSAIGFLTAA-KEELSKE-NANlpSESdVLNAQLG-DMLPFRMQPIILSKFQLVGIQTLklaESA-- 81  Bipolaris...
Q1GP33               3 yaqsARMTFANMLGTLDHLVGKAiDAKMPDD----------VLRAQLTEDMFPLELQFRVALNQVLLALNQV---GGT-- 67  Sphingopy...
ELS:G432_10565       4 mlaRTAHIFTSRLHTLLKLLDRG-EAECGIDt---------LIAARLAEDMLPLPYQIVFASDQASHFAAWC---LDE-- 68  Sphingomo...
jgi:GEI7407_1548     5 qlnsiktIFQRRLTTLEHLLKVA-QTHFNDD-------ES-FLQARIAPDMLPLGTQIAFTCNQPRNFALWC---DGK-- 70  Geitlerin...
jgi:Oscil6304_3741   5 nidSIITVFQSRLTTLEHLLKLA-QKHFGES-------EA-FLDKRIATDMLPFGTQIAFTCNQPRNFALWS---NGK-- 70  Oscillato...
jgi:Lepto7376_3447   5 nldsirAVFQSRLVTLEHLLGVA-NTYFDGD-------ES-FLQKRIIEDMLPLGTQVAFTCDQPHNFALWC---EDK-- 70  Leptolyng...
tgen:AM1_3289        5 aiasiqtLFQSRLATLEHLLKTA-QAHFSD--------ES-FLQKRIVADMLPFGTQIAFTCNQPRNFALWS---EGK-- 69  Acaryochl...
jgi:Syn6312_2641     5 siaslqnLFQSRLATLEHLLMSA-QSHFGDN-------DS-FLQTRITADMLPFGTQIVFTCNQPRNFALWY---DGK-- 70  Synechoco...
2OQM_A              93 TAPKH-DDSETTLAELRQRIASVLTYLEG--FSEA---DFANAA--TIQIS-QpRWQGKYLT-GYEFAIEHAIPNLYFHI 162 Shewanell...
CBX93585            85 AFPPMiPS-FTSFDEVIDFCKKVGAALDA--IDEK---AFNASAekSCSIFlDgPNKTLNLTgLADYFHSFVMPNSYFHV 158 Leptospha...
EMD85950            82 TAPNLdPSTFSSFDDVISFFKQLLAVLEA--VDAN---AYNESAekGVDVEi--GPKTLHMStLKSFTNDFVVPNSYFHL 154 Bipolaris...
Q1GP33              68 TVPLEeTT-YTSLAEVRQRIAAVRALVDQ--TDPArwaDAEAKV--DLTLP---NGVRFVMS-SEEDVRDWIMPNFYFHV 138 Sphingopy...
ELS:G432_10565      69 PFPRTdAA-GLDWAALKRYAADAIALVER--AAGA---VDDGVFarGKRVDl-lDGMYLEFS-GADYRDEWLMPNFYFHL 140 Sphingomo...
jgi:GEI7407_1548    71 PMDNLnPE-VTSLAQAYDHIKNTQSLLDSinTEDE---KLNGVT--CHKIA---PGFSLELS-GIDYVNEFLMPNFYFHL 140 Geitlerin...
jgi:Oscil6304_3741  71 PMNNLaPE-VTSIAAAYEHIANTQELLSSihTEDE---KLNELV--RIDS----QDRYIEIF-GHAYVNDFLIPNFYFHL 139 Oscillato...
jgi:Lepto7376_3447  71 PLEHLhPE-VKSLAHAYEHIAKTKESLANidLEKA---KLDELM--RLELG---EGDYLELL-GSVYVNDFLIPNFYFHL 140 Leptolyng...
tgen:AM1_3289       70 PADNLdPE-VTSLAHAYEHIANTQSMLIDisVADE---KLAEIT--RIDLG---DNLYLELS-GGDYIHEFLIPNFYFHL 139 Acaryochl...
jgi:Syn6312_2641    71 PMNNLdPD-VLSLQQASAHISNTKKLLADlrVEDE---KLDEVT--HIDLG---QGLYVELS-GNAYVNDFLIPNFYFHL 140 Synechoco...
2OQM_A             163 TTAYGILRHNGVEVGKKDYL 182 Shewanella denitrificans
CBX93585           159 SAMYMLLRSKGFSLGKTVYI 178 Leptosphaeria maculans JN3
EMD85950           155 NAMYMILRSKGFSLGKSIYI 174 Bipolaris maydis C5
Q1GP33             139 TMAYALLRDAGLAIGKMDFI 158 Sphingopyxis alaskensis
ELS:G432_10565     141 VTAYDILRANGVAIGKPDYM 160 Sphingomonas sp. MM-1
jgi:GEI7407_1548   141 VTTYDILRMSGVAIGKKDYM 160 Geitlerinema sp. PCC 7407
jgi:Oscil6304_3741 140 VTAYDILRMAGVPIGKQDYM 159 Oscillatoria acuminata PCC 6304
jgi:Lepto7376_3447 141 VTAYDILRMAGVPIGKRDYM 160 Leptolyngbya sp. PCC 7376
tgen:AM1_3289      140 VTAYDILRMAGVPIGKRDYM 159 Acaryochloris marina MBIC11017
jgi:Syn6312_2641   141 VTAYNILRMAGVPIGKRDYM 160 Synechococcus sp. PCC 6312
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap