1XWI


Conserved Protein Domain Family
Vps4_C

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pfam09336: Vps4_C 
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Vps4 C terminal oligomerization domain
This domain is found at the C terminal of ATPase proteins involved in vacuolar sorting. It forms an alpha helix structure and is required for oligomerization.
Statistics
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Aligned: 143 rows
Threshold Bit Score: 60.1978
Threshold Setting Gi: 326438053
Created: 3-May-2019
Updated: 18-Jul-2019
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1XWI_A          259 LTPCSPGDPGAIEMTWMDVP---GDKLLEP-VVSMSDMLRSLSNTKPTVNEHDLLKLKKFTEDFG 319  human
EFC38827        167 IVPCSRNEKNSKKMNMLDIK---QPEKLKIaKVTAKDIYDSIKSVKPSTNPSEILSFIEFTQNYG 228  Naegleria gruberi
EKC22348        211 FVPCKEDEDADLKASIVEIP----ADKVRPrEVTLNDFLSALKTHRKTVTQEEIQKFENFTKSMG 271  Pacific oyster
EDO31428        221 apPCSEGEPGCVTCLLKDLP----PQKVTPrPVVLEDFIRSLSHNGSTITDEDLDKFTVFTKSYG 281  starlet sea anemone
EGD83623        362 WRPCDEEEPGALRGNVQDIP---AEDAVAR-SVRSGDVAKAIARNPRTVSSEELARFLAYnqh-- 420  Salpingoeca rosetta
ETO32733        287 LVPCPKTDPKGQKMSLMDIPpekQDRVKAP-PLEVSHFLKILTNAKPSVGAEDIERHVKWTSEFG 350  Reticulomyxa filosa
ETO24931         42 LVPCSPADPDGKEMTLMDIPlekQDLVKAP-PLRIEHFVRILINAKPSVGLDDIQRHVQWTNEFG 105  Reticulomyxa filosa
ETO17184         42 IVPCSPADLQGKELTLMDIPpekQDLVKAP-PLKLEHFLRILVNAKPSVGAEDIKRHVDWTNEFG 105  Reticulomyxa filosa
ERT00887        914 WVPCEAGSAGARQMTWKNVP---QGKARAP-PLTVDDFFAAVAKVKPSVGANEITRCAEWTAQFG 974  Sporothrix schenckii ATCC ...
jgi:THITE_32934 262 YTPCDKTDPGAIAMTWRKVP---PNRLKEP-PLTAADLFVVMQHVKPSVAPDELDKYVAWTEQFG 322  Thielavia terrestris NRRL ...
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