Conserved Protein Domain Family
Pas_Saposin

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pfam09016: Pas_Saposin 
Pas factor saposin fold
Members of this family adopt a compact structure comprising five alpha helices. Charged and polar residues are exposed mostly on the surface, while most of the hydrophobic residues are buried inside the hydrophobic core of the helical bundle. The precise function of this domain is unknown, but it is has been shown to induce secretion of periplasmic proteins, especially collagenase.
Statistics
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PSSM-Id: 312534
View PSSM: pfam09016
Aligned: 5 rows
Threshold Bit Score: 113.846
Threshold Setting Gi: 490868410
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
OXX61909      1 MKALIYETLISLANQDPEQHAKIRENLYEQLGLPLDKQLALYSRALGPASSGKLENDQAINNAVESAIKLLETPEH 76  Vibrio sp. V15_P4S5T153
Q7M7D9        1 MKALIYETLVNLANQDPEQHATIRQNLYEQLDLPFDKQLALYAGALGPASSGKLENHEAISNAVDSVVQLLEIPEH 76  Vibrio vulnificus YJ016
Q87IZ6        1 MKTLIYDTLISLASQEPEQHARIRQNLYEQLDLPFDKQLALYSCALGPASSGKLESSQGINNAVDCAVKLLETPER 76  Vibrio parahaemolyticus
Q5DZV6        3 TTSLIYNTLTNLATAEPTQCAQIRQKLYDELNLSFDKKFALYSSVLGPVSAGRIDD---LNDAVNKARAILEDKNY 75  Aliivibrio fischeri ...
WP_004730426  3 TTTLIYDTLEGLSSAKPQQHAQIRQNLYNQLDLSFEKQLALYSSVLGPASAGRLTD---LDSAVMSARKIVGL-EN 74  Vibrio
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