3JCR,2DK4


Conserved Protein Domain Family
PRP4

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pfam08799: PRP4 
Click on image for an interactive view with Cn3D
pre-mRNA processing factor 4 (PRP4) like
This small domain is found on PRP4 ribonuleoproteins. PRP4 is a U4/U6 small nuclear ribonucleoprotein that is involved in pre-mRNA processing.
Statistics
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PSSM-Id: 337208
View PSSM: pfam08799
Aligned: 180 rows
Threshold Bit Score: 33.8168
Threshold Setting Gi: 358058161
Created: 28-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3JCR_L       107 VKACLRALGEPITLFGEGPAERRERLRNI 135 western lowland gorilla
XP_013250191 105 IFRRLRRLKQPITLFGETPWKRYDRLCKL 133 Eimeria acervulina
XP_018683695  84 VVRRLRILKQPATLFGEDDAARFRRLQAv 112 wild Malaysian banana
XP_020178934 103 VIRRLRLLRQPATLFGEDDAARLRRLHDA 131 Aegilops tauschii subsp. tauschii
XP_015159083  93 VIRRLRFLKHPVTLFGEDEDARFDRLNvv 121 potato
XP_002964125  99 VIRRLRLLKQPITLFGEDDEMRLERLKVa 127 Selaginella moellendorffii
XP_001782842 102 VIRRLRYLKQPVTLFGEDDDDRLARLKAL 130 Physcomitrella patens
XP_015647118 124 VVRRLRILREPVTLFGEDDADRLARLKFV 152 Japanese rice
XP_013605002 106 VVRRLRILKQPVTLFGEDDQARLDRLKYV 134 Brassica oleracea var. oleracea
XP_002140556  92 VIYHLRLLNEPATLFGESDEARYNRLRKA 120 Cryptosporidium muris RN66
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