Conserved Protein Domain Family
D5_N

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pfam08706: D5_N 
D5 N terminal like
This domain is found in D5 proteins of DNA viruses and bacteriophage P4 DNA primases phages.
Statistics
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PSSM-Id: 312290
View PSSM: pfam08706
Aligned: 68 rows
Threshold Bit Score: 47.079
Threshold Setting Gi: 74542874
Created: 21-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q2WEV4 410 AKIMWDYY-----GHQf-VCCGGKTQTWYR-FDGLtWVESNqGTDLRSLISAEG-----GPLRRLLmrqldavtaakarg 477  Tiger frog virus
Q54324 391 EEVLHEHFlvtfiQTDqlKESKIGLFRFNK------------KKGIFEPFDERI-----EKIINVK-------------- 439  Sulfolobus islandicus
Q975W1 351 EEITREHRlvtfkGKDqaKEYVIGLFRFSK------------KKGIYEPFDVTI-----EKIINDK-------------- 399  Sulfolobus tokodaii
Q9P9J5 373 EAVLERYKikafyQVTghNQAIVGTFVWDK------------KKGIYVPFDKGL-----RKVIRKLa------------- 422  Sulfolobus islandicus
Q973E3 373 GTILRLHKiktfyQVTghNQAVIGVFKWDK------------KKGVYTPFDKGL-----RKEIREIa------------- 422  Sulfolobus tokodaii
Q980Y2  12 GL----------------KDAIIGIFIWNK------------EKGIFEPFENRL-----RKKARALley----------- 47   Sulfolobus solfataricus
O57703 370 QYIIRKYHiitfiQKHgnGESIVGIFRWSK------------KKGIYEPVDKTL-----KKIIRHEimri---------- 422  Acidianus ambivalens
O05477 372 QYIIRKYHivtfiQKHsnGESIIGIFRWNR------------KKGIYEPIDETL-----KKIIRHEimrv---------- 424  Sulfolobus islandicus
Q4L4M3  31 SLFLYEEYhgcyiDNRphVFTGKKY-----------------EPLNIDVVRKMT-----IKYIPSL-------------- 74   Staphylococcus haemo...
Q9EMW2 352 ANFIRDLN----------IIKKIDSDAYVYwKNGK-WAIVDnPYIFQGISNMILekyrnNMLIQDI-------------- 406  Amsacta moorei entom...
Q2WEV4 478 grdsgnededdkedsatdeddsnpwdselrrldsevldAMVKRLRNNLKGIEMTGVKNNVLRECAELfyQPEFGDVIDSD 557  Tiger frog virus
Q54324 440 ----------------------------------------LEEYKEFPLGSDKSRVIRNIKEEI-----MRRTQRLLLEE 474  Sulfolobus islandicus
Q975W1 400 ----------------------------------------LEEYRDFPLGSDKTRVVKNIKDEI-----MRRTLRPLVKE 434  Sulfolobus tokodaii
Q9P9J5 423 -------------------------------------eSLQIKSRDKTLARLSKRDVDDIVDEI-----KDLKLTPIPAE 460  Sulfolobus islandicus
Q973E3 423 -------------------------------------eMLEIRSRDKTLAQLSKRDVDDIFDEI-----KDLTLTPLPKE 460  Sulfolobus tokodaii
Q980Y2  48 -----------------------------------ytdLANDELKPYVI---SKTIIDNVVDEI-----KDKTLIPLPNE 84   Sulfolobus solfataricus
O57703 423 ----------------------------------kelfPKSEEEGKVTFYEIKSGLVKLVYDEI-----MDLTLTEYDDD 463  Acidianus ambivalens
O05477 425 ----------------------------------ietfPKSEDEKSPMFYEVRNELVKLVYDEI-----RDLTLTEYDDD 465  Sulfolobus islandicus
Q4L4M3  75 -------------------------------------------------REQQNKEVFQKLKT------LCLGNYQEQCS 99   Staphylococcus haemo...
Q9EMW2 407 -------------------------------------------------DYIIKKFFGEAKNRISAN--LSMNTDIICFN 435  Amsacta moorei entom...
Q2WEV4 558 --PLLFAFANGIYDFRE--GCLRD-G-RPEDKLSRRAPVDFvmfgpipkar-hpdnspvmrPKr--------------mP 616  Tiger frog virus
Q54324 475 --SLRIAFRNGTLEWDSkgVTWy----DVKERTPKVYSFNYvdwnlkie-----eiekfnmKEitvedienlarrvcprS 543  Sulfolobus islandicus
Q975W1 435 --PMRIAFRNGTLEWNDkdITWy----DTKERTSRVYAFHYipwsvkid-----eiikferKEikvqdienlargvcpkS 503  Sulfolobus tokodaii
Q9P9J5 461 --PLRVAFKNVTIEWAIkaNIL-------HRKTPKQYSFYYlpwtvny-------eefnkmKSlsiqeieelakrlcpkS 524  Sulfolobus islandicus
Q973E3 461 --PLRIAFKNGTLEWTEkgIIWy----DAKERSPKVYSFYYlpwevkve-----eiekfmnKEitvkdieelasrlcpkS 529  Sulfolobus tokodaii
Q980Y2  85 --PLRVAFPNCTLEWKIshGRYVPsFvLAEERTPEHFAFHYiphkihleelvkineevlsaRDipidliedlarrlcpkS 162  Sulfolobus solfataricus
O57703 464 niPLRIAFENYTLEWSTdkKENIFkLiPANERTEEHYSFHYiphkird------evfnntpLPfqvseledlarklcprS 537  Acidianus ambivalens
O05477 466 ntPLRIAFENCTLEWTSdkFKLi----PADKRTEEHYAFHYvphkirv--------evfnntPyqvpeleelarklcpkS 533  Sulfolobus islandicus
Q4L4M3 100 --ARYIGLKNGIYDTLE--EKLKSf--SPQYYITNIIDVDF--------------------DKd---------------A 138  Staphylococcus haemo...
Q9EMW2 436 --PYIIQFNNGVYDLKE--SKFYTgEnAKKYIRLNYIKIDY--------------------KD----------------- 474  Amsacta moorei entom...
Q2WEV4 617 GEs-V-----------Q 621  Tiger frog virus
Q54324 544 LEt-Fkqwv---ddkwV 556  Sulfolobus islandicus
Q975W1 504 LEt-Fkswv---ddkwI 516  Sulfolobus tokodaii
Q9P9J5 525 LEt-Fkswv---gvkwI 537  Sulfolobus islandicus
Q973E3 530 LEt-Fkqwv---ddkwV 542  Sulfolobus tokodaii
Q980Y2 163 LEv-Fkqwa---nekwV 175  Sulfolobus solfataricus
O57703 538 LDt-Fkqwa---gdkwI 550  Acidianus ambivalens
O05477 534 LNa-Fkqwv---gekwV 546  Sulfolobus islandicus
Q4L4M3 139 QSdlIekfi---kdisN 152  Staphylococcus haemolyticus JCSC1435
Q9EMW2 475 ----IedmsdeekikfE 487  Amsacta moorei entomopoxvirus 'L'
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