Conserved Protein Domain Family
ArgoL1

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pfam08699: ArgoL1 
Argonaute linker 1 domain
ArgoL1 is a region found in argonaute proteins. It normally co-occurs with pfam02179 and pfam02171. It is a linker region between the N-terminal and the PAZ domains. It contains an alpha-helix packed against a three-stranded antiparallel beta-sheet with two long beta-strands (beta8 and beta9) of the sheet spanning one face of the adjacent N and PAZ domains. L1 together with linker 2, L2, PAZ and ArgoN forms a compact global fold.
Statistics
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PSSM-Id: 337161
View PSSM: pfam08699
Aligned: 279 rows
Threshold Bit Score: 31.2921
Threshold Setting Gi: 189190814
Created: 27-Mar-2017
Updated: 23-May-2017
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
O74957        161 MHSFFTGEng-vsL-GGGVEAWKGFYQSIRPNQGFMSVNVDISSSAFWR 207  Schizosaccharomyces pombe 972h-
KTB40147      254 vRSFFPGKer-vsV-GHGLELWRGYFQSIRPALDHVILNVDITTGMFFK 300  Moniliophthora roreri
XP_001876972  206 tRSFFTEDgk-rpL-RGGIELWRGYFQSIRPSMGKMIINLDISTGLMYK 252  Laccaria bicolor S238N-H82
CEL52551      256 aRSFFTDKev-rpI-GGGIELWRGYFQSVRPGLASMLINIDISTGAMYS 302  Rhizoctonia solani AG-1 IB
EPT05953       24 aRAFFV-PngsqnM-KMGLQAWHGYFQSVRPVLGKLLVNVDVVNSLVYQ 70   Fomitopsis pinicola FP-58527 SS1
EPT05167       37 ARAFFVEHgs-rdM-KGGLRAYRGFFQSVRPTIGRLLLNVDTVTALLYQ 83   Fomitopsis pinicola FP-58527 SS1
XP_002475766   24 aRSFFV-NqgnqeL-AGGLQAWHGYFQSVRPVLNRLLINVDVANAVMYS 70   Postia placenta Mad-698-R
CCO26010       11 aRSFFL-PngiqkV-GFGLQLWPGVFQSIRPAISSMHLNVDTSTGVIFT 57   Rhizoctonia solani AG-1 IB
XP_007851956  317 GRFFFS-ErgkasL-GPGYEVWRGYFQSIRPGIGRMYLNVDTSAAVVYT 363  Moniliophthora roreri MCA 2997
XP_007847822  186 aRSYFT-DqgkmiVqGSGLELLRGFFQSVRPGINQMYINVDTSMTAAYR 233  Moniliophthora roreri MCA 2997
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