Conserved Protein Domain Family
Fcf2

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pfam08698: Fcf2 
Fcf2 pre-rRNA processing
This is a family of eukaryotic nucleolar proteins that are involved in pre-rRNA processing.
Statistics
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PSSM-Id: 337160
View PSSM: pfam08698
Aligned: 148 rows
Threshold Bit Score: 69.4737
Threshold Setting Gi: 74952839
Created: 21-Mar-2017
Updated: 23-May-2017
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74588918    89 TETSDERWFNM-KQPEMTPEIKRDLQIIKQRSAL-DPKRHYKKD---K--WEIPK-------------FFQMGTIIEG-- 146
gi 74778195    67 KKPNLSSWHNF-HDHEKTEQEKFELLALQLRNST-APGRFYKSEhltK--KQI---------------KFNFGVVIDGnk 127
gi 74862606    35 KKSSLDEWGDM-KKIEKTEEIKLQWALLQHENLY-TVNEYNKLKk--D--EKMPE-------------FFQVATMVNSsd 95
gi 471229099   75 KQNTLDQWYGLqKKTNLTLEEKNQLVLLKLKGYI-NPKMHFKSSd--M--KNIPK-------------YFQVGTVIGG-- 134
gi 1098429315  85 lsrcLKGWFGL-PLQEHTPEILREFRALHLRNSV-GPKAFYKSDn-sM--KNPPK-------------YFSFGRVIDN-- 144
gi 294944805  137 KDERLDGWFGL-PRQQLTPQMKNELRILKLKPYM-DPKKFMKRLd--S--KKLPT-------------HFHIGVEVGGgk 197
gi 330795460  121 NHENKKRWYGF-GEGEITDEMKQEANLIKLQQFI-DPTRRFNRDa--V--KDLPE-------------HFEIGTFENS-- 179
gi 675126826  310 aKAHLANWYDI-PAQELSPALRRELKVLELRGHM-DPKKFHKEGl--KirSERTErrigsgvyvqhtaHLHVCTVKDGfg 385
gi 281208841  105 pvhENKKWFGF-GEGEITEEMKLEAELIRLKSFAdNTKKRSKDA---T--KELPK-------------YFEVGTFINN-- 163
gi 156095983   41 KKEHLNEWGNM-KRKEKTDELKLQWKLIQHENLA-EKGEYHKVKk--D--EKMPQ-------------FFQVATLVNGnh 101
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 74588918   147 ---------N-------TEFYS-SRLKRKE-RGKTMVEELLHDDTTKKYFKRK 181
gi 74778195   128 mkt--glsdD-------SSTY---RSNKKI-SGISLLHELVNNSETQRWTNKK 167
gi 74862606    96 kik-vgagkE-------SQSLH-TSNRRKK-KTLSALQMLERNNDLKQWCINK 138
gi 471229099  135 ---------S-------DYGVGiEKISRKK-RQNNIANELIELDKKAQFTKKK 170
gi 1098429315 145 ---------SklrtgfgNECST-AQNTSNK-SGSSFVQELVRDSSTQKWANMK 186
gi 294944805  198 vra--gggeE-------SQAAG-TYNKRSRgSGVSLLSDALKDSTVQAWTQRR 240
gi 330795460  180 ---------H-------VDYFN--RFTNKE-KKRGALGDILNNERALKYIDDK 213
gi 675126826  386 srggvgagrE-------SEAVG-CSKRRKG-KGGSLLSSLLKDASVETWTKKK 429
gi 281208841  164 ---------H-------EDYY--NRFTNRE-KKRGNLGDIMEDEKVMNYIDRK 197
gi 156095983  102 kik-vgagqE-------SQSLH-TSNRRKK-KCLSALQQLERDQDMKDWCVKR 144
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