Conserved Protein Domain Family
SRP72

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pfam08492: SRP72 
SRP72 RNA-binding domain
This region has been identified as the binding site of the SRP72 protein to SRP RNA.
Statistics
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PSSM-Id: 312106
View PSSM: pfam08492
Aligned: 28 rows
Threshold Bit Score: 39.2363
Threshold Setting Gi: 922511896
Created: 23-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q17FK4       537 ASGKTDQSPGTPSSEIAKQKk-------KTVRKRKGKL-PKNYD---ASAVPDPERWLPRYERSGYRK 593 yellow fever mosquito
Q5CY17       565 sEKDSHDSKSMSHANLTIKTk-------SKHKKRKPRY-PKGFDplnPGQEPDPERWLPKEQRSSFKK 624 Cryptosporidium parvum
XP_014170617 595 aKKRSRDADETAANTPLAKKaktpatlsRQARKLQAKD-AATFD---AAKTPDAERWLPLRDRSSYrp 658 Grosmannia clavigera kw1407
XP_015784341 531 VKKITKVEPSPGNIKEDIKK--------TKKRKKKKQL-PKKFD---PDVDPNPERWLPRWQRSTYKK 586 two-spotted spider mite
XP_001550743 546 esskKRALDDKEKENEDPAKk------qKTIGTRKSKL-PKDFE---EGKKMDPERWLPLKDRSSYRP 603 Botryotinia fuckeliana B05.10
CCF47104     541 SESKKRRLDAQPTETI-------------NKKKRRRKL-PKDYV---EGKKMDPERWLPLRDRSSYRP 591 Colletotrichum higginsianum
XP_007812775 544 AGSKKRRSPTAPRSEr------------PSQRRKRIRL-PKNFV---EGQTPDPERWLPLRDRSTYRP 595 Metarhizium acridum CQMa 102
AJV91031     534 lESSAKRSKNTAVSKVQKRKv------lELKKKRKIKRlEKFLQgrdTSKLPDPERWLPLRDRSTYRP 595 Saccharomyces cerevisiae YJ...
XP_016758646 535 aQPPSSSVPKSLKRPAEDTKp------kKAKKARKSRL-PKNYD---PNKKPDPERWLPLRDRSTYRP 592 Sphaerulina musiva SO2202
XP_013591719 540 KPMEGAAAAASAMQEEVKKEk------aKKKRKRKPKY-PKGFDpanPGPPPDPERWLPRRERSSYRP 600 Brassica oleracea var. oler...
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