Conserved Protein Domain Family
PAS_3

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pfam08447: PAS_3 
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PAS fold
The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs. The PAS fold appears in archaea, eubacteria and eukarya.
Statistics
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PSSM-Id: 312074
View PSSM: pfam08447
Aligned: 120 rows
Threshold Bit Score: 41.9398
Threshold Setting Gi: 75486977
Created: 22-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

pfam08447 is not assigned to any domain superfamily.
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
4F3L_A      263 FLFLDHRAPPIIGYLPFEVLGTs--gYDYYHVDD-LENLAKCHEHLMQYGKGK-SCYYRFLTKGQQWIWLQTHYYItYhQ 338
gi 81543763  77 VISANPLFLNAVGYRLEELTGKh--hRIFCSPAEcQSQQYQQFWTSLAQGKSH-SGTFMRYKKDGSLLVLEATYFP-I-K 151
gi 81729051 164 VITANANFLHVMGYALAEIKGKh--hRSFCEPSLvNSPEYSEFWRKLNNGEFI-GDQFKRLGKHGRVVWLEATYNP-VfD 239
gi 81739978 285 IITANANFLGTLGYSLAEIKGHh--hSMFVEPAErDGAAYREFWAALNRGQ-YqAAEYKRIGKGGKEVYIQASYNP-IlD 360
gi 81730240 149 VLYANKPFIETMGYSLAEIEGKh--hRLFCLDEDaASAEYAKFWKSLSEGV-FvAGRFRRLDKRGRVVWLEATYNP-IkD 224
gi 81729469 164 VITANQQFLQAMGYTLAQVANRs--hRMFCHAGDaESPQYTAFWKKLNQGEYV-EGRFRRMDSRGKEIWLQATYNP-VhD 239
gi 81440567 167 VIKANQNFLDTMGYRLDEVVGRhhglFCLAHERE--SAQYREFWASLNRGE-YhSHRFERVNKQGQTVFLEASYNP-IfD 242
gi 81729051  42 ILRANDNFLATMGYRADELTNKt--hRDFCEPEVlRSREYADLWASLKAGKFI-SGTFKRINKNGHSVWLEASYNP-ViD 117
gi 81543763 198 IISANSAFLKTMGYSLDQIKGKh---HRLFCFDE-FYQQHPTFWKSLAAGQAY-SGRFLRKNSYGSQVWIQASYSP-VkD 271
gi 81791074  69 VLTCNEAFARMRGQSVKEIEGSs--iVSLYAPED-QQMVKDKLK--ITDSTGFcSCQAKMMRKDGTIFPVQIDVVG-LkD 142
                        90
                ....*....|..
4F3L_A      339 WNSRPEFIVCTH 350
gi 81543763 152 TDGKVSSVMKIA 163
gi 81729051 240 VDGKLYKIVKFA 251
gi 81739978 361 LNGKPFKVVKYA 372
gi 81730240 225 ASGQVYKVAKFA 236
gi 81729469 240 SAGRLYKVVKFA 251
gi 81440567 243 SKGRLCKVVKFA 254
gi 81729051 118 TQGKVVKVVKYA 129
gi 81543763 272 QNNKVYKIVKFA 283
gi 81791074 143 ENGQIMYRIVTV 154
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