3PSP,3EBB


Conserved Protein Domain Family
PUL

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pfam08324: PUL 
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PUL domain
The PUL (PLAP, Ufd3p and Lub1p) domain is a novel alpha-helical Ub-associated domain. It directly binds to Cdc48, a chaperone-like AAA ATPase that collects ubiquitylated substrates.
Statistics
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PSSM-Id: 337001
View PSSM: pfam08324
Aligned: 186 rows
Threshold Bit Score: 64.6529
Threshold Setting Gi: 930408679
Created: 24-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3PSP_A       180 KQYLIMEn-YNPDTIFNGIVKI-NSne-----------ktFDD-----------------------EILA------QIGG 217 baker's yeast
Q5K9K8       356 kraitvsnlPNYPALLNKLEGF------------------LADkgktesfmvlknevvpflegkslSETEla---aLLQK 414 Cryptococcus ne...
XP_002839609 302 mNPVIFTkvPPLDKVIEKLGPT-GKnpvvvs---irdfitLRD-----------------------SQGA-------IEA 347 Tuber melanospo...
XP_003840138 316 qrsITFTkvPPLSKVVAKMGEV-GK-----------------D-----------------------PAVS------SIVS 348 Leptosphaeria m...
CCA70383     317 lNPILFTqiPKLDALSTKLLSA-VEtsplpvadrgntkeviaN-----------------------GMIR------SLSS 366 Piriformospora ...
XP_014178612 229 tNPITATatPNFTALFGKLEGF-------------------AGaagkqhvdvlknevvpflegkggDAVG------VVDK 283 Trichosporon as...
XP_011112785 317 qppvTYSrqLPLDKVLIKLGKVgTEgpv----------iaMKDfiv-----------------tkqKQGAiearvpDLQK 369 Dactylellina ha...
XP_011117413 319 qapVKYTrqLPMDKVLVKLGKVgTDenv----------vaMKNfit-----------------tkqKQGAiearvpDLQK 371 Arthrobotrys ol...
XP_008025844 315 QRPVRFTkvPPLEKVVAKMGDAgNDpsv----------taIVNyiq-----------------vreKSGAieapltELPK 367 Setosphaeria tu...
XP_003304342 300 qRPVKFTkvPPLEKLVAKMGDLgHDpav----------ssIVSfiq-----------------areQSGAieapltKLPQ 352 Pyrenophora ter...
3PSP_A       218 A-------LHDIdeswel---------llsfaNTIRSNW--EIKTPAYDIVRLIVK--K--------------------- 256 baker's yeast
Q5K9K8       415 W-------SAAT--------------------QDLLPALqpTETFPLIDLWRIALQ--Cqpiipfiglglstassnaepi 465 Cryptococcus ne...
XP_002839609 348 P-------LQQLsdwa-------------tflRESFTGLptATLFPLADLFRVVLS--Dhrvsgwfaeekgnttik---- 401 Tuber melanospo...
XP_003840138 349 F-------IEAReksgaieaplgklpqfaeflRKSTSLLspELLFTAYDLFRVALT--Dirvagffaeehkgatgtpat- 418 Leptosphaeria m...
CCA70383     367 IpngktptANSTkvpetef------snwtsvtVQLAAVLppTDFFPLVDLWRLALLipD--------------------- 419 Piriformospora ...
XP_014178612 284 W-------TAAS--------------------GALLQSLkpAEVFPIVDLWRLGLL--Ndgvvrvltprvggpsdpiap- 333 Trichosporon as...
XP_011112785 370 W-------SSFL--------------------QASFKELplETLFPLVDIFRLSLT--Dprisayyaeerghati----- 415 Dactylellina ha...
XP_011117413 372 W-------SKFL--------------------QSSFQELppETLFPVIDIFRLSLT--Dprvsafyaeepqhati----- 417 Arthrobotrys ol...
XP_008025844 368 F-------AEFL--------------------RKSTYSLpaELLFTALDLLRIAIT--Darvagffaeehkgamgtpat- 417 Setosphaeria tu...
XP_003304342 353 F-------AAFL--------------------KNSTSVLppEILFTALDLLRISLT--Dirvagffaeehrgatgtpat- 402 Pyrenophora ter...
3PSP_A       257 ----------------------Lpyssdikdyie----------eglgnknitltMLTVRILVNCFNNENW-GvKLLEsn 303 baker's yeast
Q5K9K8       466 tsiislasntfssspeaipkpfI--------------------------------LTVLRLLTNFTSCVEL-T-NLVLah 511 Cryptococcus ne...
XP_002839609 402 ------amlsyvtnhtsvpyplR--------------------------------LVTLQATCNLFTSPLF-P-AHLTs- 440 Tuber melanospo...
XP_003840138 419 ---vhhllqhvnalgetapyylR--------------------------------LTNLHLSCNLFTSPLF-I-PHILs- 460 Leptosphaeria m...
CCA70383     420 ----------------------VstqlatspiislptifkissesasspdaknltLTALRLACNIFVNPVLtR-RLLQss 476 Piriformospora ...
XP_014178612 334 --ilaltakelkqgvaatprplL--------------------------------LTTLRLETNLLAPLPL-A-TAAL-- 375 Trichosporon as...
XP_011112785 416 ------qalletassekaiyqlR--------------------------------LVTLHAICNLFSTPLF-P-PHLIr- 454 Dactylellina ha...
XP_011117413 418 ------ealldtalsakgiyqvK--------------------------------LVTLHAICNLFSTKLF-P-PSLTn- 456 Arthrobotrys ol...
XP_008025844 418 ---vfhlldhvdklgegapyplR--------------------------------LTTLHLACNLFSAPLF-I-PHILs- 459 Setosphaeria tu...
XP_003304342 403 ---vhyildhvdklgesapyplR--------------------------------LTTLHLACNLFTSPLF-I-PHLLs- 444 Pyrenophora ter...
3PSP_A       304 q--vykSIFETIDTEFSqaSAK-Q---SQNLAIAVSTLIFNYSALVtkg------------------nsD------LELL 353 baker's yeast
Q5K9K8       512 d--gnvSTSEQLISVLV--ESL-Ly-pDVGVRSAAAGVAFNIGLWRhhnvv--------------eetpNvd--weLEVV 569 Cryptococcus ne...
XP_002839609 441 -----pSLSHLVTSLITtsLLDkS---HINARVAAASLAFNLATHVqkqr----------------avyNeevlqdVEFI 496 Tuber melanospo...
XP_003840138 461 -----hPLSETLISILTtaLLDdK---HPALKTSALSLAMNIASANhrirmrkhgan-tdpatpeaaelPvp--eqVELL 529 Leptosphaeria m...
CCA70383     477 pandgsRPRDAITNLLVsaLLS-D---VATVRVAAASLAFNIAAFLqaplmqslnrgmsgtpikedsldDae--weVELL 550 Piriformospora ...
XP_014178612 376 ------ARPDDLLSVLV--EAL-Lh-pDVGVRKAAADVAVNAAAWRhrvreatpq------tpdapeigGed--weTELL 437 Trichosporon as...
XP_011112785 455 -----aPLVALVIGLVT--TCL-LdesHSQLRVAAASLIFNLAAYNqksrvessa-----tvadridalSdd--dqIQLL 519 Dactylellina ha...
XP_011117413 457 -----aPLVTLVLGLVT--GCL-LdesHPQLRVAAAGLIFNLASFNqklrtesas-----tvadredsiSed--dqIQLL 521 Arthrobotrys ol...
XP_008025844 460 -----pPLSSTLISILT--TAL-LdekHSALKASALTLAMNITSSNhqirmkqysan-pshslpsaselPds--eqVELL 528 Setosphaeria tu...
XP_003304342 445 -----pPLSSTLISILT--TAL-LdekHAALKASALSLAMNISSSNhqvrmkkysan-ssrslssecelPes--eqVELL 513 Pyrenophora ter...
3PSP_A       354 PIVADAINtkygpleEYQECEEAAYRLTVAYGNLATv-------EPT---LRQFANSVTWLANI-K-----RsygnvpR- 416 baker's yeast
Q5K9K8       570 SGLVEALD-------R-EEDEDVAHRLLAALALEIYlspsyednVQP---MLQVLEASNKIEKRcKvwk-------rkE- 630 Cryptococcus ne...
XP_002839609 497 AAIVEALK-------EERDSKEVVKGLALAVSLVSYcapl-ggeILE---LLKVLEAGGVLSEKaK-----AgmgekaL- 559 Tuber melanospo...
XP_003840138 530 ASLLENLS-------ADGQWSDDKKMGLIATGWLVYgadv-egeLRD---TWKVMDAAGTVDKL-------QprsgedRl 591 Leptosphaeria m...
CCA70383     551 SAVIEAID-------RE-DNEDSLHRLVSCLGLLVHls----phLAEiqpLLEVLQVKQTLVVKaQpdgpiKkenvkkL- 617 Piriformospora ...
XP_014178612 438 SALVEAIA-------R-EEDSDTGHRLLVAAALVMYlnpgwdegIQP---LLEVLGARDTIDKAaRrwn-------nkD- 498 Trichosporon as...
XP_011112785 520 ATVVESVD-------ReKESTEALRGLILSLGLIVYgakv-dgeVLE---LVGVLEAARIIDEKgKkse-------kkL- 580 Dactylellina ha...
XP_011117413 522 AAIVESID-------ReNESTEALRGLLLSLGLIVYgaki-dgeVLE---LAGVLEAARIVGEKgKksd-------kkL- 582 Arthrobotrys ol...
XP_008025844 529 ASLLENIS-------TeEQWSDNKKMGVISVGWLVYcadm-sgeVRD---LWRVMDAAGTLGNVdA-----KmaedrmL- 591 Setosphaeria tu...
XP_003304342 514 ASLLETIS-------TeEQWSDNMKVSLICVGWLVYaadm-ngeLSD---LWKVVDAAGTVGKAeA-----Kmaedrllv 577 Pyrenophora ter...
3PSP_A       417 -FKDIFDD 423 baker's yeast
Q5K9K8       631 -VKKVGEE 637 Cryptococcus neoformans
XP_002839609 560 -CQEVAKl 566 Tuber melanosporum Mel28
XP_003840138 592 lIKEVkgl 599 Leptosphaeria maculans JN3
CCA70383     618 -VKEVTNE 624 Piriformospora indica DSM 11827
XP_014178612 499 -IRKLADE 505 Trichosporon asahii var. asahii CBS 2479
XP_011112785 581 -LGDdgar 587 Dactylellina haptotyla CBS 200.50
XP_011117413 583 -LGEdgar 589 Arthrobotrys oligospora ATCC 24927
XP_008025844 592 -VKEVksl 598 Setosphaeria turcica Et28A
XP_003304342 578 kevkslle 585 Pyrenophora teres f. teres 0-1
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