1GAX


Conserved Protein Domain Family
Anticodon_1

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pfam08264: Anticodon_1 
Click on image for an interactive view with Cn3D
Anticodon-binding domain of tRNA
This domain is found mainly hydrophobic tRNA synthetases. The domain binds to the anticodon of the tRNA.
Statistics
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Aligned: 162 rows
Threshold Bit Score: 48.9347
Threshold Setting Gi: 189083148
Created: 3-May-2019
Updated: 18-Jul-2019
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1GAX_A 607 DRFMRSRLSRGVEEITALYE-A-LDLAQAAREVYEL---VWSEFCDWYLEAAKPAL--KAG-NAhtlRTLEEVLAVLLKL 678  Thermus thermophilus...
Q057G3 685 KKTYIYKLNTIIKKVTYNIQ-ErNSFNTAIAEIIK----FFNYLVKLYKIYNIKK------------KNLIFCISTIIKM 747  Buchnera aphidicola BCc
Q4FNR0 689 GNDLAKFTNQLINKITQNLE-K-FHYNVIVANFYE----MYNFLIKEIDKPIKK-------------EILIENYKKILIV 749  Candidatus Pelagibac...
Q2NIH0 666 ETSLNAIYHQTIFQTTQDYE-K-LKFNKVISQLMI----FVNQVYKHQKIGK-------------------KQAQIFLQL 720  Aster yellows witche...
Q8EW18 644 DENLEKKYHQFVKKASEFME-N-FDFNLVISEMMIF-------INECYKYE----------------KINYDYMLNFCVI 698  Mycoplasma penetrans...
P59433 698 QQHIYSELHKTIKIVSQYIT-DtQSFNVAISKIMKF----SNTLMSISLKNEQNQ------------ALMQESLLAVIQM 760  Buchnera aphidicola ...
Q15031 725 ARKLWEYKNSVISQVTTHFT-EdFSLNSAISQLMGLsnaLSQASQSVILHS----------------PEFEDALCALMVM 787  human
Q09828 713 SRKLESQYNEFISQCSAHYE-NvFSLNLVISDAMKLtnnIADALKNNKVNI----------------GTIKASLEVLVKC 775  Schizosaccharomyces ...
Q6C363 655 DRTLWNETQHYVKSASDSFH-EsLQLNTVISDYMKL----------------TNTLqkESGaSP---EVQLYALETLLKI 714  Yarrowia lipolytica
Q0CKU8 784 DADAVLFTHRTISSVTSCIEtNpYGLNTVISDLTKL----------------TNALasSTPtSP---QIVYLCVSSLLRL 844  Aspergillus terreus ...
1GAX_A 679 LHPMMPFLTSELY---QAltg----------keeL--ALEA-W--Pe--Pgg---rDEEAerAFEAlkqAVTAVRA---- 731  Thermus thermophilus...
Q057G3 748 LYPFTPHICFILWkkiyg------------kkscIekET---W--PkfnKkfflkeKNNI---------IIQINGK---- 797  Buchnera aphidicola BCc
Q4FNR0 750 MNPFIPHFSNECLsti--------------------nenQIsW--PeisKedlieeDINF---------VVQINGK---- 794  Candidatus Pelagibac...
Q2NIH0 721 LNPIAPHLTEEINqtil-------------knktQ--LVALtW--PfydKnhleqlQVKI---------IVQVNSK---- 770  Aster yellows witche...
Q8EW18 699 LSCFAPFITEEINevfl-------------knkkF--ISDNlW--PkydEkki------vetTIKI---PVQINGK---- 748  Mycoplasma penetrans...
P59433 761 LYPFIPHFSFAIWefls-------------pkkeN--IDFIsW--Pk--YnfkailSKL---KYTI---IIQINGK---- 811  Buchnera aphidicola ...
Q15031 788 AAPLAPHVTSEIWaglALvprklca--hytwdasV--LLQA-W--PavdPeflqqpE-----VVQM---AVLINNKacgk 852  human
Q09828 776 IAPIIPCFSSECWlllg-------------hnssV----YSnW--PiskNkkenmeE-----PVTI---PVQINGK---- 824  Schizosaccharomyces ...
Q6C363 715 MSPVAPAMAEECWelicksk--------gaewssV--FRNA-F--PeaqAeiqsatVPFK----------VMINGKfqft 771  Yarrowia lipolytica
Q0CKU8 845 LAPVAPALASECWeilHNttvqnevagsaggartI--FDCP-WptPllsAeqvgalATRG--GQTV---AVQINGK---- 912  Aspergillus terreus ...
1GAX_A 732 LK-----------AEAGLP-PAQE------VRVYL 748  Thermus thermophilus HB8
Q057G3 798 KK-----------DIMKIH-AIISk-----KEIIK 815  Buchnera aphidicola BCc
Q4FNR0 795 KR-----------AILKIK-RDVVe-----KEILE 812  Candidatus Pelagibacter ubique HTCC1062
Q2NIH0 771 LR-----------AVLELP-FNLSs-----EQIKI 788  Aster yellows witches'-broom phytoplasma AYWB
Q8EW18 749 IR-----------EVLEIN-LGAT-------QKDV 764  Mycoplasma penetrans HF-2
P59433 812 KR-----------HKILAL-KNSS------QEKIL 828  Buchnera aphidicola str. Bp (Baizongia pistaciae)
Q15031 853 IP-----------VPQQVA-RDQDk-----VHEFV 870  human
Q09828 825 VR-----------FKIEMP-KLND-------ENEI 840  Schizosaccharomyces pombe 972h-
Q6C363 772 ANkphdfgsqseaEILAQLrTISDklgdkpVRKVI 806  Yarrowia lipolytica
Q0CKU8 913 LR-----------FTVTVPrm--------pSTTAS 928  Aspergillus terreus NIH2624
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