4QU4,5E02


Conserved Protein Domain Family
DSHCT

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pfam08148: DSHCT 
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DSHCT (NUC185) domain
This C terminal domain is found in DOB1/SK12/helY-like DEAD box helicases.
Statistics
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PSSM-Id: 336931
View PSSM: pfam08148
Aligned: 400 rows
Threshold Bit Score: 74.018
Threshold Setting Gi: 506429958
Created: 27-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4QU4_A        934 DIIELKGRVACEISSGDELLLTELIFNGNFNELKPEQAAALLSCFAFQERc-----Ke---------------------- 986  baker's yeast
WP_013189548  648 FQLRDAGIMLQSVYNERDLLVVECLRRGVFDDLNVADLAGALSVCLAQNRtg---gLsrl-------------------- 704  Mobiluncus cu...
WP_013399075  805 lKLTTKGEALRKLYGEKDLLTSICLEKGFLTDLDPAAIAATIAALTYQGKketieiLp---------------------- 862  Rothia
WP_041648754  774 feLTGSGRRLRRIYGDRDLLTSQILETGKLTALNAEELCAVVASLVYQARrdgdraDp---------------------- 831  Arthrobacter ...
WP_048769395  741 DEVTPAGTMLTRIYSELDLVVAQAIREKVFAELNGPQLAAVLSTMVYEARatdt-------------------------- 794  Propionibacte...
WP_012871387  763 gyPTAKADTLANVFDTNGLVICEMIDRGFLDKLNPADVAEVFSWFAYDRDfrfantY----------------------- 819  Sphaerobacter...
WP_012641583  769 gYPTSKADTLADVFDTNGLIICEMLDRDFFKGLEPADVAEVFSWFAFDREtrfanhF----------------------- 825  Thermomicrobi...
WP_012874434  759 GYQTEKTDLLANLFDTNGLIICEMIYRGYLDNLSPPDIAEVLSWFAYDRDrqfsnmH----------------------- 815  Thermobaculum...
ABZ83609      625 GTLLPRGAVLGKLHVEE-LLVTEWLFEGLFHDVTETQLAALIGGVVQEESrfephvTgasrnmggwlekardtffrvrdl 703  Heliobacteriu...
XP_001709520 1172 yLLTDKGRVACHVSSANEVILVECLFEAQFTDLTPRVLAGVLASLLGEGTgasgssKsn--------------------- 1230 Giardia lambl...
4QU4_A        987 --------------aPRlKPELAEPL--------Ka---------mREIAAKIAkimkdskievvekdyV---------- 1025 baker's yeast
WP_013189548  705 -------------ipAEaSASLAIALesmg-rinFeia-------tlQQEHYLE---------------A---------- 738  Mobiluncus cu...
WP_013399075  863 ---------------RYpHPSLQVSIatinreldHln--------vhEERHELD---------------Q---------- 894  Rothia
WP_041648754  832 ---------------KMpTSKIDEIWnsti-kiwGels-------daEEALNLD---------------P---------- 863  Arthrobacter ...
WP_048769395  795 ------------gghRMpDDTSARAEralr-svwRevg-------lvERDHRVE---------------R---------- 829  Propionibacte...
WP_012871387  820 ---------------SLpNRlvl---------lrRrlddlereilmAERQNNLF---------------I---------- 850  Sphaerobacter...
WP_012641583  826 ---------------TLpTKlvl---------lrRrlesleqevfeVERRNGLA---------------L---------- 856  Thermomicrobi...
WP_012874434  816 ---------------ILpKHlin---------lrRqlddletrilrAESRAGVQ---------------I---------- 846  Thermobaculum...
ABZ83609      704 vpaglpqphfrsegcYLiKT------------------------------------------------------------ 723  Heliobacteriu...
XP_001709520 1231 -------------qlQM-DPKLSQAL--------Tk---------lKQIVSMLLk--------------Dcatedttlel 1265 Giardia lambl...
4QU4_A       1026 ------EsF-RHELMEVVYEWCRGATFTQICKMTd-VYEGSLIRMFKRLEELVKELVDVANTi--gNSSLKEKMEAVLKL 1095 baker's yeast
WP_013189548  739 ------YpPlETDLLPGVVAWAQDISLGQCLELTg-MSAGDFVRVIRQVIDLADQLRKLNLN-----PALHAKFRSVINQ 806  Mobiluncus cu...
WP_013399075  895 ------TpPcDLGLVTPIYRWARGMHLAKALEDTg-LAAGDFVRWAKQVIDALDQIAHIPTi----SPNLRASCEKAIAL 963  Rothia
WP_041648754  864 ------TaPpESGLIWPMYKWARGSSLNSALRGTd-LAPGDFVRWAKQVIDTLDQFAKNTDl----PPLLVRNAYKAVDQ 932  Arthrobacter ...
WP_048769395  830 ------QrDlDIGFADAAAQWASGASLADILGEFg-LTAGDFVRWTRQVVDLASQISAAPGLaelgSPGLARTCRAVIGL 902  Propionibacte...
WP_012871387  851 ------TtGhNDGFYGAVRAWCHGATVSRILEQIe-LSEGDLVLTFNKTLDLMRQVREMLAHam-pEHPLRDVLERAEAL 922  Sphaerobacter...
WP_012641583  857 ------StGhHEGFYGAMRAWCNGATMAEITELIe-LSEGDLVLTFNKSLDLMRQVREMLEKly-pDHPLRWSIATAEAL 928  Thermomicrobi...
WP_012874434  847 ------SqGyNPYFFGMMRAWCNGASLSQILDKVd-IGEGDLVMTFNKTLDLIRQVRDMLVQad-pGSPLLPKLDQATAL 918  Thermobaculum...
ABZ83609      724 -------------LIETV-------NWTEYLTLVn-MAEGDAIALARRTMDVLRQLARAVEE----DEALRKKVGRAQDL 778  Heliobacteriu...
XP_001709520 1266 rcttvdHiV-DDTTAVIAFSWAAGQTFQEILDIDrsQFEGNIVRMFRRLINLVDQLIIAVEVi--gDERLKARLTAVHDA 1342 Giardia lambl...
4QU4_A       1096 IHR-DIV 1101 baker's yeast
WP_013189548  807 VKR-GVV 812  Mobiluncus curtisii
WP_013399075  964 IRR-GVV 969  Rothia
WP_041648754  933 IKR-GVV 938  Arthrobacter arilaitensis
WP_048769395  903 LRR-DIV 908  Propionibacterium freudenreichii
WP_012871387  923 VKR-DIV 928  Sphaerobacter thermophilus
WP_012641583  929 ARR-DII 934  Thermomicrobium roseum
WP_012874434  919 ARR-GII 924  Thermobaculum terrenum
ABZ83609      779 VARpEVV 785  Heliobacterium modesticaldum Ice1
XP_001709520 1343 IFR-DII 1348 Giardia lamblia ATCC 50803
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