4QU4,5E02


Conserved Protein Domain Family
DSHCT

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pfam08148: DSHCT 
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DSHCT (NUC185) domain
This C terminal domain is found in DOB1/SK12/helY-like DEAD box helicases.
Statistics
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PSSM-Id: 377963
View PSSM: pfam08148
Aligned: 390 rows
Threshold Bit Score: 73.6579
Threshold Setting Gi: 218764174
Created: 20-May-2019
Updated: 18-Jul-2019
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4QU4_A                    934 DIIELKGRVACEISSGDELLLTELIFNGNFNELKPEQAAALLSCFAFQERck--eaP-----RL-KPELAEPL------- 998  b...
jgi:Tter_0478             759 GYQTEKTDLLANLFDTNGLIICEMIYRGYLDNLSPPDIAEVLSWFAYDRDrqfsnmH-----ILpKHlin---------l 824  T...
tigr:trd_0169             769 gYPTSKADTLADVFDTNGLIICEMLDRDFFKGLEPADVAEVFSWFAFDREtrfanhF-----TLpTKlvl---------l 834  T...
bcmhgsc:HMPREF0573_11694  648 FQLRDAGIMLQSVYNERDLLVVECLRRGVFDDLNVADLAGALSVCLAQNRtg---gLsrlipAEaSASLAIALesmg-ri 723  M...
CBL56862                  758 DEVTPAGTMLTRIYSELDLVVAQAIREKVFAELNGPQLAAVLSTMVYEARatdt-----gghRMpDDTSARAEralr-sv 831  P...
bcmhgsc:HMPREF0733_11944  805 lKLTTKGEALRKLYGEKDLLTSICLEKGFLTDLDPAAIAATIAALTYQGKketieiLp----RYpHPSLQVSIatinrel 880  R...
BAI64876                  871 LSLTTGGQALRRIYGERDLLTALCLDAHFLDGLEPAAIAATVAALTYQGKrdaveyLa----HYpHPSLRAPIatitqrl 946  R...
tigr:AAur_2186            821 VTISTDGQRLRRIYGEKDLLISQTVRRGAINDLDAAELASFASTLVYQAKredrglRp----KMpSVSLESAIdivi-re 895  P...
jgi:Arth_2185             794 VTINADGQKLRRIYGEKDLLISQSLRQGAFSDLDATEVAALASVLVYQAKreerglRp----RMpSVSLETAVdivv-re 868  A...
BAG29725                  770 lRPTAAGEQLRRLYGERDLLLALSLRDGFLDGLDAPGLAGVMTALVYQPRredqgtRp----RLpTAAMDAAVqtll-en 844  K...
4QU4_A                    999 -Ka---------mREIAAKIAkIMkDskievvekdyvesfRHELMEVVYEWCRGATFTQICKMTdVYEGSLIRMFKRLEE 1068 b...
jgi:Tter_0478             825 rRqlddletrilrAESRAGVQ-ISqGy-------------NPYFFGMMRAWCNGASLSQILDKVdIGEGDLVMTFNKTLD 890  T...
tigr:trd_0169             835 rRrlesleqevfeVERRNGLA-LStGh-------------HEGFYGAMRAWCNGATMAEITELIeLSEGDLVLTFNKSLD 900  T...
bcmhgsc:HMPREF0573_11694  724 nFeia-------tlQQEHYLE-AYpPl-------------ETDLLPGVVAWAQDISLGQCLELTgMSAGDFVRVIRQVID 782  M...
CBL56862                  832 wRevg-------lvERDHRVE-RQrDl-------------DIGFADAAAQWASGASLADILGEFgLTAGDFVRWTRQVVD 890  P...
bcmhgsc:HMPREF0733_11944  881 dHln--------vhEERHELD-QTpPc-------------DLGLVTPIYRWARGMHLAKALEDTgLAAGDFVRWAKQVID 938  R...
BAI64876                  947 aDln--------aaEEQFKVN-PTpAc-------------DFGLVEPMYAWANGAHLAKAIEDTgLAAGDFVRWAKQVLD 1004 R...
tigr:AAur_2186            896 wSqle-------dtEERNRLP-LTgEp-------------ELGLMWPMYKWAKGRHLQDVLSGTdLAAGDFVRWAKQVVD 954  P...
jgi:Arth_2185             869 wSvle-------daEEENKLP-LTgEp-------------ELGLVWPIFKWAKGKHLQEVLNGTdLAAGDFVRWVKQVID 927  A...
BAG29725                  845 wSvls-------arEAEHRLP-LTaVp-------------ELGLVEAMHRWARGATLTRTLTGTdLAAGDFVRWAKQTID 903  K...
4QU4_A                   1069 LVKELVDVANTi--gNSSLKEKMEAVLKLIHRDIV 1101 baker's yeast
jgi:Tter_0478             891 LIRQVRDMLVQad-pGSPLLPKLDQATALARRGII 924  Thermobaculum terrenum ATCC BAA-798
tigr:trd_0169             901 LMRQVREMLEKly-pDHPLRWSIATAEALARRDII 934  Thermomicrobium roseum DSM 5159
bcmhgsc:HMPREF0573_11694  783 LADQLRKLNLN-----PALHAKFRSVINQVKRGVV 812  Mobiluncus curtisii ATCC 43063
CBL56862                  891 LASQISAAPGLaelgSPGLARTCRAVIGLLRRDIV 925  Propionibacterium freudenreichii subsp. sherma...
bcmhgsc:HMPREF0733_11944  939 ALDQIAHIPTi----SPNLRASCEKAIALIRRGVV 969  Rothia dentocariosa ATCC 17931
BAI64876                 1005 ALDQIAHIRSl----DPVIRARCEEAIEAVRRGVV 1035 Rothia mucilaginosa DY-18
tigr:AAur_2186            955 LLDQLAKIPQl----DPRLARICRESIDLVRRGVV 985  Paenarthrobacter aurescens TC1
jgi:Arth_2185             928 LLDQLAKIPGl----DPRLSRLCSEAIVLVRRGVV 958  Arthrobacter sp. FB24
BAG29725                  904 VLDQLRGVHGl----DPALRDTAHEAIEAVRRGVV 934  Kocuria rhizophila DC2201
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