Conserved Protein Domain Family
SpoU_sub_bind

?
pfam08032: SpoU_sub_bind 
RNA 2'-O ribose methyltransferase substrate binding
This domain is a RNA 2'-O ribose methyltransferase substrate binding domain.
Statistics
?
PSSM-Id: 369659
View PSSM: pfam08032
Aligned: 97 rows
Threshold Bit Score: 43.3909
Threshold Setting Gi: 81790698
Created: 3-May-2019
Updated: 18-Jul-2019
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Q9XWY8          44 ALFGLHSVLEAIRSG-KRdFHSVFLKKAvenRADSDarIKEILSRIDEL--GIQKTLLTDDQLDRLTEFQLHNGICMDAS 120 Caenorhabditi...
Q81L29          31 FVEGFHLVEEALKAG----VVTELIVSD----------QTDLPKDWTVN--DVEMYIVPEAIVKVLRETETTQGVFAVCE 94  Bacillus anth...
Q8Y7Q4          31 LVEGFHLVEEALRQD-GL-VLELLVSSG----------V-SVPEEWLKG--DYDVFEISTEISHLISETMTEQGVFAVVA 95  Listeria mono...
Q9K894          31 LIEGYHLVEEALKST-IT-IETILVTES----------V-TLPTAWHVD--ERDVILVSDRVMADLTETKTPQGIAAICH 95  Bacillus halo...
jgi:Mesil_0612  30 LIEGAREIERALQAG-IE-LEQALVWEG---GLNPE---EQQVYAALGRvgRLALLEVSEAVLKKLSVRDNPAGLIALAR 101 Meiothermus s...
Q8CXU2          46 FIEGYREILRAQKSGkIK-FQNILFSPE---CFLGE----NEFSLIRSI--GTKNIKVPKKIFEKVSYRDRPDGLIATAF 115 Leptospira in...
O84408          29 LLEGFREIHRALISG-YR-CSHVFCGEL---IADKE--I-ALDRELTSL--GIEKLYCSKDILEKLSFKENPENFIAVFE 98  Chlamydia tra...
Q9PQG4          33 IIEGFKLLDEALQN--QQtIVSIIINEH---VYNKE--FETIFKYTLYD--NIQIYKVSGNIIKKLSVNIEPSPILAVVK 103 Ureaplasma pa...
Q9VW14         141 IVEGRRLIQEALQCG-LK-MEVLLFSQK---DQLALv--kEEVGVAQVEt-GTKIYKVPQHDLKTWSSLVTPPGLMAIFD 212 fruit fly
Q2FZE0          31 LIEGVHLIEEAYQSG-IV-ITQLFAIEP---ARLDQ----QIIAYAQ------EVFEINMKVAESLSGTVTPQGFFAIIE 95  Staphylococcu...
Q9XWY8         121 ALQFS 125 Caenorhabditis elegans
Q81L29          95 KHESE 99  Bacillus anthracis
Q8Y7Q4          96 TSEPd 100 Listeria monocytogenes
Q9K894          96 IPDEP 100 Bacillus halodurans
jgi:Mesil_0612 102 MPERt 106 Meiothermus silvanus DSM 9946
Q8CXU2         116 FFETG 120 Leptospira interrogans
O84408          99 KKELS 103 Chlamydia trachomatis
Q9PQG4         104 IKQEM 108 Ureaplasma parvum
Q9VW14         213 RPSDK 217 fruit fly
Q2FZE0          96 KPHYd 100 Staphylococcus aureus subsp. aureus NCTC 8325
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap