Conserved Protein Domain Family
Integrin_B_tail

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pfam07965: Integrin_B_tail 
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Integrin beta tail domain
This is the beta tail domain of the Integrin protein. Integrins are receptors which are involved in cell-cell and cell-extracellular matrix interactions.
Statistics
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PSSM-Id: 311770
View PSSM: pfam07965
Aligned: 136 rows
Threshold Bit Score: 50.7221
Threshold Setting Gi: 47213191
Created: 26-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
pfam07965 is a member of the superfamily cl06832.
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
4G1E_B       608 CTFKKECVECKKFDRGALHDE-NtCNrYCR--DEIESVKELKDTGkD---AVN-CT---YKN-E-DDCVVRFQYYED-Ss 674
gi 13431773  654 CVEYKNCVMCQQWQTGPLNET-A-CD-QCE--FKVIPVEELPNLN-E---TTP-CQ---FVD-PaDDCTFYYLYYYD-Ea 718
gi 954375374 628 CIEYKPCVMCQQFKTGPYNES-M-CA-QCP--FTVIPVDELPESNnT---GVK-CQ---FVD-QaDDCTFYFMYELDeDt 694
gi 642922463 625 CEELRPCVECQIYKSGVFNEE-E-CQsNCTf-FQSEAVDKLENSHdE---QVKtCT---LVD-E-NDCTFAFQYEYV-Ne 692
gi 671410305 661 CVEHKPCVMCQQWQTGPYNET-Q-CDe-CT--FTVIPVKELPVLNdT---TE--CQ---FVDpS-DDCTFYFLYYED-Qr 725
gi 47551111  655 CDINQPCVQCRAFHTGAYNKS-Q-Ck-NCPh---PIYVVKELRREeG---HQE-CR---FTD-D-DECHVIFTYEIL-Pn 718
gi 321478691 524 CNELKECVQCKAFNTGPLSKD-G-Cr-NCE--FNVTLVEEIKETKeG---DQI-CSfqqYQD-G-LYCNFFFVHNRL-Km 591
gi 307188100 689 CEELKDCVECVAYNTGPLAKDgK-CD-LCMheIDIVDVVEEDPVKdEetgARI-CR---TPG-D-AGCTFVFKYQYH-Rd 759
gi 260829593 645 CEGNKGCVQCQAFQSGDVTDV-D-CL-QCP--FNVTMVDSVDVVV-DdpeTQL-CR---FRD-D-DDCLFTFSYGKG-Dd 711
gi 732743005  45 CIEYKPCVMCQQWGTGPYDEE-R-CA-ECP--FKVIPVEELPELN-D---TTA-CQ---FVD-PaDDCTFYYLYYYD-Ea 109
                         90       100
                 ....*....|....*....|....
4G1E_B       675 -GK------SILYVVEEPECpkGP 691
gi 13431773  719 tDN------ATVWVRKHKDC--PP 734
gi 954375374 695 -NN------VTVWVRKEKDCppPv 711
gi 642922463 693 -KN------LKVTAEKEKICrgPP 709
gi 671410305 726 tDN------LTVWVKEEKDCppPv 743
gi 47551111  719 -GT------YYIEVQEDKICpgAP 735
gi 321478691 592 --E------SNIPVGEKGECsePP 607
gi 307188100 760 -GTggdikiFKIQAQKERTCpaPi 782
gi 260829593 712 -NS------LVVNVQRTKEC--PP 726
gi 732743005 110 tDN------ATVWVREHKDC--PP 125
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