Conserved Protein Domain Family
TraG_N

?
pfam07916: TraG_N 
TraG-like protein, N-terminal region
The bacterial sequences found in this family are similar to the N-terminal region of the TraG protein. This is a membrane-spanning protein, with three predicted transmembrane segments and two periplasmic regions. TraG protein is known to be essential for DNA transfer in the process of conjugation, with the N-terminal portion being required for F pilus assembly. The protein is thought to interact with the periplasmic domain of TraN to stabilize mating-cell interactions.
Statistics
?
PSSM-Id: 369594
View PSSM: pfam07916
Aligned: 60 rows
Threshold Bit Score: 163.725
Threshold Setting Gi: 81377823
Created: 4-May-2019
Updated: 18-Jul-2019
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
PRJNA210423:M911_14335   8 ELFTTLYGWQLYNNIWGILMATGLVFipfiVILIRNFVSVNtsmea-nagsAALVRRMEIDIVLALTVVVLAGQPAINLH 86  Ectot...
CBJ91610                 8 EYFLTLLGWVVNNGLWQVLIATGLFTvpllFKIMALWLKIRedsveegnagLRSLSRLENTLYGAFFVMIACCVPLVQVS 87  Xenor...
ACR67598                 8 EYFLTLLGWLVNNGLWDVLVSTGLFAlplaFKVASIWLKVReegedegnkgMLSLPRIENALYGAFFVMIACCVPLIQVS 87  Edwar...
VBC:UMN179_p00003       13 EYYLTVLGWFINNGIWDLLVETGLFStpffAHLIRFWLKVReegddegnkgKLLLNRIEHAFYLSMVVILFTCMPLFTIN 92  Galli...
vbi:Avin_36380          12 EYYLTLVGWLVNNGIWNLISDTGLFAvpfiVIVAREWLKVRqegadegnkgVLSLARIETHLYVGYMVVSLAGIPAVHVG 91  Azoto...
jgi:Ajs_2179            10 EYYLTLVAWVVNNGIWSILVASGVFAlpfvAIVIQEWLKARsegadegnkgVLSSMRIENRVWVAIVVIMFAGIPFIPVD 89  Acido...
jgi:Aave_0582           10 EYYLTLVGWIVQNGIWNILVASGAFAlpfvAIVVQEWLRARgegadegnkgVLSAARIENRVWVAVVVILFAGIPFIDVD 89  Acido...
CAP41713                10 EYYLTLVGWIVHNGIWSVLVASGLFAlpflAIVIQEWLKARaegadegnkgVLSSMRIENRVFVAIVVIMFAGIPFIDVD 89  Borde...
DSC:DSC_04040           10 EYYLTLVSWIVHNGVWNVLVASGVFAipflAIVIQEWLKARaegadegnkgVLSSARIENRVFVAIVVIMFAGIPFIDVD 89  Pseud...
jgi:Tola_2451           10 EYYLTLLGWIIHNGIWAVLVSSGVFAipfvAIIIQEWLKARaegadegnkgALSSVRIENRVWVAIVVVMFAGIPFIDVD 89  Tolum...
PRJNA210423:M911_14335  87 MNDlsft--ppaTLDNPAPtavdpsstgttfghpdgGFTGapssvpVPVWWYGVMALSSGINQAIITGFPATNELREIER 164 Ectot...
CBJ91610                88 LSTlqydpsrakTCGTWTPtspqetg----yapvisSLGEht--aaVPVWWAVVHRLSKGLTQAAVASVPCRPDLRQLRF 161 Xenor...
ACR67598                88 LSTlefdksrgkTCGTWTPkapnetg----ysgiisSMDGes--aaAPVWWVLVHKLSKGVTQAAVASIPCRPDLRQLRF 161 Edwar...
VBC:UMN179_p00003       93 VNNitydetrskQCKVSIIspqqss-----msymqtTLDGqq--akMPLWWAFTTVVSKAVTQAAITTIPCSPDIRQLRF 165 Galli...
vbi:Avin_36380          92 LDTlqfdqeraqQCQTTVPapadtg-----wsttfsSLAGks--aqVPIWWAFMHALSKGITSGAVAAIPCGTDLRQMRM 164 Azoto...
jgi:Ajs_2179            90 LATirfdttrsaQCQVSVPlpndtg-----wsnvytALNDqs--alVPVWWFFMHALSKAVTGSAVAAIPCGTDLRQIRM 162 Acido...
jgi:Aave_0582           90 LSTiqfdtsrskQCKVDVAvpqdtr-----wanaftTLNNqs--arVPVWWFFMHAISKAVTGAAVVAIPCGTDLRQMRM 162 Acido...
CAP41713                90 LNTisfdqsrssQCQVNVPapsdtg-----wgqsftTLNNqs--akVPVWWFFMHSISKAVTSAAVAAIPCGTDLRQMRM 162 Borde...
DSC:DSC_04040           90 FTTlqfdrsrsaQCQVNVPepsetg-----wsqsfsTLNNqs--arVPVWWFFMHAISRAVTGASVAAIPCGTDLRQIRM 162 Pseud...
jgi:Tola_2451           90 LNTiqydqarsaQCQVSVPqpsdtg-----wsqsfsTLNNqs--arVPVWWAFMHALSRAITGASVAAIPCGTDLRQIRM 162 Tolum...
PRJNA210423:M911_14335 165 AMRSLYIEDANLRHEVNQFYSRCYVParskfqrdqpsaaAPILANQGRDDPdwigshvyRQLPGYYDSLNAGNpvpgfpv 244 Ectot...
CBJ91610               162 EVQHTRIASAALAAELQDFTHDCYALalyqw---kqrdqGQTGDPAVLKDIdwlgsqtfL-S-GDYNTLQSRTprahfpw 236 Xenor...
ACR67598               162 EVQRTFIENRALADELQDFTNDCYSLalyqw---krrdqGQTTDKATLSDLswigsstfL-K-GDYTTLQSKLprgmfsw 236 Edwar...
VBC:UMN179_p00003      166 EVNNTLITSAVLRQEVQDFFEQCYVParkk-----ikrkNVKTNEVQDRDLdwigsrlmVETPNLYDSYRAKMprpefpy 240 Galli...
vbi:Avin_36380         165 EVDATRIANPLLAQEVADFSHDCFGPsrarlfmrqpdlgAMANDAKALQDLnwigsrffLDTAGYYDTDYSKTpraawpy 244 Azoto...
jgi:Ajs_2179           163 DVDATRIDDPVLAQEVADFTHDCYGPsraklf-----mnrptlSDEQMNDVtwigssyfLDTPGFYDTYRAKTprtawpy 237 Acido...
jgi:Aave_0582          163 EIDSARINDPVLAQEVADFTRDCYGParaklf-----mgrpelSDAQMNDVtwigsayfLGTGGYYDIYHSQTprtswpy 237 Acido...
CAP41713               163 DIDNTRIDDPLLAQEVTDFALNCYGParaklf-----mnrpnlSEEQMADVswigsnyfVDTPGYYDTYRSSTprepwpy 237 Borde...
DSC:DSC_04040          163 DIDNTRIADPVLAQEVADFTHNCYGPararlf-----mdrpdlTEEQMHDVtwigsrffVDTPGFYDTYRSRSpregwpy 237 Pseud...
jgi:Tola_2451          163 EVNATRIDDPVLAQEVADFTHDCYGParaklf-----msrpdlDEAQMHDVtwigsryfLDNAGYYDTYRARTprdgway 237 Tolum...
PRJNA210423:M911_14335 245 dmsretdqywmdtsgslshgIPTCQQWWEdashglrqrlle----------------dnsrtqrvvtwvQSRfpgltveE 308 Ectot...
CBJ91610               237 iesr-----dsgrpntgrggYPTCKAWWSapqtgledrvlaqadp---------glwlrlsaalkmlgkRSR-------E 295 Xenor...
ACR67598               237 sdar-----dsgrpntgnggYPYCSEWWSaadtglkarvmkqvdd---------sywlrlsaamkmigsSQT-------D 295 Edwar...
VBC:UMN179_p00003      241 dpkr-----dqalpntgkggFPKCNEWWDkpgvglkarlleqyspstiasfkqtydldknyynanpkriSDS-------E 308 Galli...
vbi:Avin_36380         245 dakrd----vglpqvtggggYPTCKQWWSdsgkglrarlqaqvap---------dlltrfqgwanwlsqEEV-------T 304 Azoto...
jgi:Ajs_2179           238 datrd----aglaqvdsgggYPSCRQWWAdggqglrsrllaqvdp---------dlltrigrwagflsqSEV-------N 297 Acido...
jgi:Aave_0582          238 datrd----aglaqvangggYPTCRQWWNdgdrglrsrllaqvds---------gllarvgrwasfvsrQQA-------D 297 Acido...
CAP41713               238 ddsrd----agltevpsgagYPNCREWWSdgstglrarllaqvdp---------nllsrmanwagfisrTEL-------D 297 Borde...
DSC:DSC_04040          238 dsnrd----aglaevpsgagYPTCRQWWSdgnglrsrllqqvdp----------slltrvagwagflsrDQV-------D 296 Pseud...
jgi:Tola_2451          238 dsnrd----aglaqvpsgagYPTCRQWWSdsgnglrarlleqvdp---------sllnrlagwagflsrAEV-------D 297 Tolum...
PRJNA210423:M911_14335 309 RQDTLARNILEqaPQSYvdsvaslrerd--------tggmdlpgplSFSVLGMVGSGNElftqgvsaiglvsfytlfMEP 380 Ectot...
CBJ91610               296 YKAAVIRRLVS--PVNLtvsqegyvyagyg---gnadftvwngsnrAGASAGVMLGGLL------------------AYP 352 Xenor...
ACR67598               296 YQEEVIRRLVS--PANLtvshggevyngyg---gnagmtamnaisrVAGTAGASVASLG------------------AFP 352 Edwar...
VBC:UMN179_p00003      309 MADVLVRNLVK--PEKMavsngkiysnlssdiisdffsglrsglskLVAGAGTTTTLAV------------------VTP 368 Galli...
vbi:Avin_36380         305 --DAVIRELVS--PNRQlagavysdyggra----gegqtishaltrTLGTIGIITGATE------------------YFP 358 Azoto...
jgi:Ajs_2179           298 --DSVIRAVVS--PRQQkmnqgavytdygg----qidktlpnvvtrGASDLGLTVGSLA------------------FFP 351 Acido...
jgi:Aave_0582          298 --DAVIRAIAA--PRQQtmnqgqayadygg----qvdmtlpnivtrGAADAGLAVGSVG------------------FFP 351 Acido...
CAP41713               298 --DSVIRAIAA--PRQQklnqgavytdygg----qidktlpnvvtrAAGDVGMAVGAIG------------------LFP 351 Borde...
DSC:DSC_04040          297 --DSVIRAIAS--PRQQklnqgavysdygg----qiemtlpnivtrAASDVGMTVGALG------------------FFP 350 Pseud...
jgi:Tola_2451          298 --DSVIRTIAS--PRQQklnqgsvytdygg----qidktlpniinrAASDVGMAVGGLA------------------YFP 351 Tolum...
PRJNA210423:M911_14335 381 TLALILQALPFIQALTLMGIYAMLPLVLLFGMYQPsILLVGAIAIFTVKFWAVLWHITLWVDNNLLQSLYTGTSLLERVg 460 Ectot...
CBJ91610               353 MLDAVRQALPMMQAVLLMALYILLPLILLLAAYEFkTVLTLTFVIFALNFLTFWWELARWLDSFLLDALYG-----SDTh 427 Xenor...
ACR67598               353 ALDAMRQALPMVQAVILMAIYIMVPLILTFAAYEFkTVITLTLVIFAVNFLTFWWELARWLDSWLLTALYS-----SDTh 427 Edwar...
VBC:UMN179_p00003      369 GFDAMRQALPMIQGLLSVVFVISIPFVMVFSGYSMkAAMVMTFIQFGLYFLTFWWELARWLDSSLLSGLYG-----SDTh 443 Galli...
vbi:Avin_36380         359 GVDIVRQGLPMVLAFLKMAMVICLPMVLLIGAYQLqVAMTMSVIYFAIMFVDFWFELARWVDSTILDALYGSGL----Qs 434 Azoto...
jgi:Ajs_2179           352 AMDVVRQALPMVLTMLKMALVICIPLVLLIGTYDLkTVVTVSCVQFALFFVDFWFQLARWIDSTILDALYGWGFGADRPh 431 Acido...
jgi:Aave_0582          352 AMDVVRQALPMVLSFLKMALVICVPLVLLFGTYDLkAVVTMSCVQFALFFVDFWFQLARWIDSTILDALYGW----SGPh 427 Acido...
CAP41713               352 AMDVMRQALPMSLSLLKMALVICIPLVLVIGTYDLkTLVTVSVVQFALFFVDFWFQLARWVDSTILDALYGWGWGYNRPm 431 Borde...
DSC:DSC_04040          351 AMDVMRQALPMVLALLKMALVICIPLALLVGTYDLkTLVTVSVVQFALFFVDFWFQLARWIDSTILDALYGWGFGWNRPh 430 Pseud...
jgi:Tola_2451          352 AMDVVRQALPMVLAFLKMALVICIPMVLLIGTYDLkTVVTLTVVQFALFFTDFWLQLARWIDSTILDALYGWGWGWNRPh 431 Tolum...
PRJNA210423:M911_14335 461 pdl----------ksilLTTIIAGLYLGLPVIWSAMMGwVGFKAVGAINSaTSELSSSSK 510 Ectothiorhodospira haloal...
CBJ91610               428 slfnlagl-qntsddliMALVMGMLFIVLPMVWLGALAwAGVRMGD-ISG-MMNQGVGQv 484 Xenorhabdus nematophila A...
ACR67598               428 srfnmmgf-qntsddliMNLVMGTMFLMLPAVWIGALSwAGVHLGGAISN-SMKTGTDKA 485 Edwardsiella ictaluri 93-146
VBC:UMN179_p00003      444 syfnlygl-enteddtvVKLVIGAMYIVFPGFFMMAMGkAGVAVGEVAGY--LGSAAQKT 500 Gallibacterium anatis UMN179
vbi:Avin_36380         435 ltfdpligmqnesqsilLNYVIGAMFIILPMFWVGALGwAGIQAGKVLEG--LSDGTKAA 492 Azotobacter vinelandii DJ
jgi:Ajs_2179           432 tnfdpliglnnafgdmlLNFVMAMMFIVLPGFWVAALAwVGVRVGNISQM--LSAATDGA 489 Acidovorax sp. JS42
jgi:Aave_0582          428 snldpllglnnafgdmlLNFVMASMFLILPGVWVAALGwVGVQAGTMARM--LATGTDGA 485 Acidovorax citrulli AAC00-1
CAP41713               432 tnfdpvmglnnafgdllLNFVMATMFLVLPGFWLAALTwVGVRAAGIVSA--FSNSTKDA 489 Bordetella petrii
DSC:DSC_04040          431 snfdpliglnnafgdmlLNYVLATMFLVLPAFWVTALAwTGIRAGNFLQG--LAAGTRDA 488 Pseudoxanthomonas spadix ...
jgi:Tola_2451          432 tnfdpliglnntfgdmlLNFVMGAMFLVLPGFWVAALGwVGFRAGHTIQG--MAEGTKGG 489 Tolumonas auensis DSM 9187
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap