Conserved Protein Domain Family
Nif11
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pfam07862: Nif11 
Nif11 domain
This domain is found mainly in the Cyanobacteria and in Proteobacteria such as the nitrogen-fixing bacterium Azotobacter vinelandii. It is found in Nif11, a protein described in Azotobacter as linked to nitrogen fixation. It also constitutes a leader peptide in Nif11-derived peptides (N11P), which are thought to be post-translationally modified microcins derived from a putative nitrogen-fixing protein. N11P sequences have a classic leader peptide cleavage motif, usually Gly-Gly, which marks the end of family-wide similarity area and the beginning of a low-complexity region rich in Cys, Gly and Ser.
Links
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Statistics
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Aligned: 124 rows
Threshold Bit Score: 30.8654
Threshold Setting Gi: 81573209
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
WP_011936020         6 AEEQLQRFLHKVDQlnalvalidaDPQLRARLAGC--D---THRQV----VDFASTLGLEIGRRWG 62  Synechococcus sp. RCC307
jgi:Cyan10605_1042   2 SQEAAIQFLEAVPE----------NEELQQKLVAIleSsenDREDA----AQLANEYGYDITPDEL 53  Cyanobacterium aponinum...
jgi:Npun_AF077       2 SQENLEQFYVLVQN----------SEQLQELLGAT--E---NTDSFnelaVRLGQDNGYNFTIQEv 52  Nostoc punctiforme PCC ...
jgi:Cyan7425_5262    1 mnEQLQQFKEQVLQ----------DPALAEQFKAV--S---DLQDFidlaIRLGQEQGYSFTAEDL 51  Cyanothece sp. PCC 7425
WP_012628449         1 maQSLEQFRQQVLQ----------DPALAEHFKTV--Q---SSDEFvklvLQLGQQLGYSFAAEEV 51  Cyanothece sp. PCC 7425
jgi:Cyan7425_3052    2 S-QSLEQFRQQVLQ----------DPTLAEQFKAV--Q---SPEEFanlaVRLGQEGGYNFTVEEv 51  Cyanothece sp. PCC 7425
WP_012628450         1 maKSLDQFRQQVLQ----------DPALAEQFKAI--Q---SPDEFanlaVQLGQQLGYNFTADEV 51  Cyanothece sp. PCC 7425
WP_012628453         1 mtQSLEQFREQVLQ----------DPSLSEQFKTV--S---NSDEFaalaVQLGQRLGYSFTAEDV 51  Cyanothece sp. PCC 7425
jgi:Cyan7425_1587    1 mtQSLEQFKQQVLQ----------DPTLAEQFKAA--S---SPDEFvnlaVQLGQQLGYSFTAEDI 51  Cyanothece sp. PCC 7425
WP_015182551         2 SLESLQQFYQRVLE----------DPALQERVRRA--T---SQESLvrlmVRLGQENGYDFTVEEV 52  Microcoleus sp. PCC 7113
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