5KNE,1UM8


Conserved Protein Domain Family
AAA_2

?
pfam07724: AAA_2 
Click on image for an interactive view with Cn3D
AAA domain (Cdc48 subfamily)
This Pfam entry includes some of the AAA proteins not detected by the pfam00004 model.
Statistics
?
PSSM-Id: 336783
View PSSM: pfam07724
Aligned: 139 rows
Threshold Bit Score: 87.2514
Threshold Setting Gi: 75015142
Created: 23-Mar-2017
Updated: 23-May-2017
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
5KNE_A 601 QP-ASFLFLGLSGSGKTE---------LAKKVAGFLFnd---------edMMIRVDCSELSE----KYAVSKLLGTTAGY 657 baker's yeast
Q88W26 200 NSeVTIEMDDPQQAAAGNnn------mLGQMGIDLGDslgalmpkkriqrTMPVSEAREILVreesEKLVNNADIYHDAI 273 Lactobacillus plantar...
Q48735 193 NEeVTIEVEQAPKA-NPMgd------mMGQMGMDMSSmlgdmlpkkkvkrTLPVSQARKLLVqeeeKKLVNYDDIYQKAM 265 Lactobacillus leichma...
Q8Y7J8 196 DEiVTVEVKEQQ---NPMldmm-rgagMDQMNGMQDAlsgmfp-akkkkrKVTVREAKKILFedeaSKLIDADELAAEGI 270 Listeria monocytogene...
Q8R9Y3 187 NHmVEIEVTDTT---PPMlemy-tnlgAEELNITLQDmfsdllpkkkklrKVTVAEAKKILEaeeaQNLIDMDEVIEEAV 262 Caldanaerobacter subt...
Q7M8Z7 166 HLkIEIQPPKKSV---DFsegn-vppeIVRIQESLAKaflnsq-keemkkEVTVKEAKELLKieasEALLDMETIKAEGL 240 Wolinella succinogenes
Q7VJD4 170 DLmIEIEISKKPI--SQFnden-mppdMIKVQESIFKvlnvsq--dkikkEMSVKEAKEALAyeaiESVLDAESIRAEGL 244 Helicobacter hepaticus
O25254 171 SReIEIEVRKKSI---EIdsnv--ppeILRVQENLIKvfhkeq--dkvkkTLSVKEAKEALKaeisDTLLDSEAIKMEGL 243 Helicobacter pylori 2...
O66574 177 DRiVEIEVKEKT---VPMvgia-gppgLEELENQIKEmlsgli-pskrrrKVKVKEALQILEqeeaEKLIDMEEVAREAI 251 Aquifex aeolicus VF5
Q8KD63 208 DRqIELEVSSDGQ--GGMmqifgplgqMEEIGNIMQDlmsgmp-kkrkkrRMTIAEARKYLEqeevQKLIDMDAVVKEAL 284 Chlorobium tepidum TLS
5KNE_A 658 VGYDEGGfltnqlqykpysVLLFDEVEKAHP---------------DVLTVMLQMLDDGRITSGQGkTIDCSNCIVIMTS 722 baker's yeast
Q88W26 274 VRAENTG------------IIFIDEIDKITKggqqgs---gevsreGVQRDILPIVEGSQISTKYG-PINTDHILFIASG 337 Lactobacillus plantar...
Q48735 266 DRAGQSG------------IIFIDEIDKITAadkrns---agvsreGVQRDILPIVEGSTVSTKYG-PLSTDHILFIAAG 329 Lactobacillus leichma...
Q8Y7J8 271 HRAEQMG------------MIFIDEIDKIASkegggn---aqvsreGVQRDILPIVEGSQISTKYG-TVNTEYILFIAAG 334 Listeria monocytogene...
Q8R9Y3 263 KRAENDG------------IIFIDEIDKIAStgysag---pdvsreGVQRDLLPIIEGCTVMTKYG-PVKTDYILFIAAG 326 Caldanaerobacter subt...
Q7M8Z7 241 RRAEEEG------------IIFIDEMDKIAVsqgsssr--qdpskeGVQRDLLPIVEGSTVSTKHG-QIKTDYILFIAAG 305 Wolinella succinogenes
Q7VJD4 245 RRAQENG------------VIFIDEIDKVAVgskdgsr--qdpskeGVQRDLLPIVEGSVVNTKYG-QIKTDYILFIAAG 309 Helicobacter hepaticus
O25254 244 KRAESSG------------VIFIDEIDKIAVsskegsr--qdpskeGVQRDLLPIVEGSVVNTKYG-SIKTEHILFIAAG 308 Helicobacter pylori 2...
O66574 252 YRAENFG------------IIFIDEIDKIAVktpgag---pgvsreGVQRDLLPILEGTTVNTKYG-PVKTDHILFIGAG 315 Aquifex aeolicus VF5
Q8KD63 285 RKVEDSG------------IVFIDEIDKIAApttgaggkgpdvsreGVQRDLLPIVEGTAVSTKYG-VVKTDHVLFIASG 351 Chlorobium tepidum TLS
5KNE_A 723 NLGAEFINSqqgskiqestknlvmgavrqhFRPEFLNRISSI 764 baker's yeast
Q88W26 338 AFAESKPSD---------------------LIAELQGRFPIR 358 Lactobacillus plantarum WCFS1
Q48735 330 AFAESKPSD---------------------LIPELQGRFPIR 350 Lactobacillus leichmannii
Q8Y7J8 335 AFHMSKPSD---------------------LIPELQGRFPIR 355 Listeria monocytogenes EGD-e
Q8R9Y3 327 AFNVAKVSD---------------------LIPELQGRFPIR 347 Caldanaerobacter subterraneus subsp. tengcongensis MB4
Q7M8Z7 306 AFHLSKPSD---------------------LIPELQGRFPLR 326 Wolinella succinogenes
Q7VJD4 310 AFHLSKPSD---------------------LIPELQGRFPLR 330 Helicobacter hepaticus
O25254 309 AFHLSKPSD---------------------LIPELQGRFPLR 329 Helicobacter pylori 26695
O66574 316 AFHMAKPSD---------------------LIPELQGRFPIR 336 Aquifex aeolicus VF5
Q8KD63 352 AFHVARPSD---------------------LIPELQGRFPIR 372 Chlorobium tepidum TLS
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap