Conserved Protein Domain Family
C1-set

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pfam07654: C1-set 
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Immunoglobulin C1-set domain
Statistics
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PSSM-Id: 311543
View PSSM: pfam07654
Aligned: 70 rows
Threshold Bit Score: 67.2994
Threshold Setting Gi: 121039
Created: 19-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
pfam07654 is a member of the superfamily cl11960.
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1O0V_A       223 PEVYAFAT-PEWPGS-RDKRTLACLIQNFM---PEDISVQWLHNEVQlpDARHSTTQPRKTkGSGFFVFSRLEVTRAEWE 297
gi 408360260 110 PLVTLFLP-SLKNLQ-ANKATLVCLVSEFY---PGTLVVDWKVDGVPvtQGVETTQPSKQT-NNKYMVSSYLTLISDQWM 183
2QHR_L       122 PTLTVFPP-SSEELK-ENKATLVCLISNFS---PSGVTVAWKANGTPitQGVDTSNPTKEG--NKFMASSFLHLTSDQWR 194
gi 125945      6 PTITLFPP-SKEELNeATKATLVCLINDFY---PSPVTVDWVIDGSt--RSGETTAPQRQS-NSQYMASSYLSLSASDWS 78
2GJ7_B        18 pSVFLFPPkPKDTLMiSRTPEVTCVVVDVShedPE-VKFNWYVDGVEvhNAKTKPREEQY--NSTYRVVSVLTVLHQDWL 94
2VUO_A        10 pSVFIFPPkPKDTLMiSRTPEVTCVVVDVSqddPE-VQFTWYINNEQvrTARPPLREQQF--NSTIRVVSTLPIAHQDWL 86
gi 125139      5 PTVLIFPP-APAQLA-TGAVTIVCVANKYF---PDG-TVTWEVDGKPltTGIETSKTPQNSdDCTYNLSSTLTLQKSNYN 78
1GAF_L       113 PSVFIFPP-SDEQLK-SGTASVVCLLNNFY---PREAKVQWKVDNALqsGNSQESVTEQDSkDSTYSLSSTLTLSKADYE 187
1LK3_M       112 PTVSIFPP-STEQLA-TGGASVVCLMNNFY---PRDISVKWKIDGTErrDGVLDSVTDQDSkDSTYSMSSTLSLTKADYE 186
1P2C_D       113 PTVSIFPP-SSEQLT-SGGASVVCFLNNFY---PKDINVKWKIDGSErqNGVLNSWTDQDSkDSTYSMSSTLTLTKDEYE 187
                         90
                 ....*....|....
1O0V_A       298 QKDEFICRAVHEAA 311
gi 408360260 184 PHSRYSCRVTHEGn 197
2QHR_L       195 SHNSFTCQVTHEGd 208
gi 125945     79 SHETYTCRVTHNGt 92
2GJ7_B        95 NGKEYKCKVSNKAL 108
2VUO_A        87 RGKEFKCKVHNKAL 100
gi 125139     79 SHNEYTCQVAQGAg 92
1GAF_L       188 KHKVYACEVTHQGL 201
1LK3_M       187 SHNLYTCEVVHKTS 200
1P2C_D       188 RHNSYTCEATHKTS 201
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