Conserved Protein Domain Family
FliD_C

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pfam07195: FliD_C 
Flagellar hook-associated protein 2 C-terminus
The flagellar hook-associated protein 2 (HAP2 or FliD) forms the distal end of the flagella, and plays a role in mucin specific adhesion of the bacteria. This alignment covers the C-terminal region of this family of proteins.
Statistics
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PSSM-Id: 311255
View PSSM: pfam07195
Aligned: 26 rows
Threshold Bit Score: 127.438
Threshold Setting Gi: 81737786
Created: 27-Mar-2017
Updated: 23-May-2017
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18203159  237 GTNAEVEFIDpimsSePIVVSDSrTNRVTVGGITFSL----------------TGTTEGFE--TLNVSSNTDAAFEKVME 298
gi 13124751  433 ASDSAFTYNG----V-SITRPTN-EVNDVISGVNITL----------------EQTTEPNKpaIISVSRDNQAIIDSLTE 490
gi 18203355  256 AQNAEFTLDG----I-KMFRSSN-TVTDLGVGMTLTL----------------NKTGe----iNFDVQQDFEGVTKAMQD 309
gi 18202218  449 AQDAAFDFDG----V-HVTRGTN-SITDLIPGVTLSL----------------HERTEKTE--TLSVTPDVNAMKNAIIE 504
gi 18202049  391 AENAKIKFDG----V-DVERDSN-VINDLVPNVTLSL----------------KKPSSDMV--EAKIEPDYEGIKRVLLD 446
gi 81741859  242 SDNSIIKVDN------NLYYRKTnIIRDVLKNVTLNLkkts---------kesSKNLEDGE--TLSFYFNKEKFLKFFKD 304
gi 81592031  258 GQNALATVNG----I-AVQSPTN-TLSNVVDGTSLTL----------------SKIGs----tMVSVANDSTSTTTGVVN 311
gi 120320    224 AENAKLNVNG----I-DIERQSN-TVTDAPQGITLTL----------------TKKV-TDA--TVTVTKDDTKAKEAIKS 278
gi 9911074   222 AQNAQLTVNN----V-AIENSSN-TISDALENITLNL----------------NDVTTGNQ--TLTITQDTSKAQTAIKD 277
gi 502949001 233 AANAKLTVNG----I-PIERQTN-EIKDAPEGIILNLkkvseteevivkvngeDKKIPRPKteTLVVSRDIEPMKEAIKK 306
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18203159  299 FVDTYNATITELRSLLSEpryrdypplteeqrrelSereaelwDEKAKSGLLRNDSMLNSLLAQMRADLYA--PVQtNGQ 376
gi 13124751  491 FVKAYNELIPKLDEDTRY-----------------D-------ADTKIAGIFNGVGDIRAIRSSLNNVFSY--SVHtDNG 544
gi 18203355  310 LVDAYNDLVTNLNAATDY-----------------N-------SETGTKGTLQGISEVNSIRSSILADLFDsqVVDgTTE 365
gi 18202218  505 FVAKYNRLMAEINIVTSNksaii-------delayLtpe-ekkKETEQLGSLHGDSTLLMLKDRLRRNTSNayRAGdDGA 576
gi 18202049  447 FIGAYNEVLAEINIVSSNedqpnnqksniveeltyLsds-qkeEAYKNLGILRSEFLLKNLKSKLESIIFKpyVTS-DPN 524
gi 81741859  305 FVKSFNLFINESNKLREFeineksi---spyqkrnD-------KLLYNIGPFIGDYLLNNITNKLKFLIRKnfDDYkNKN 374
gi 81592031  312 FVKAYNALRISLNSLTNid-----------------------tSNSANNGALASDVSTKTLINQITDVLGQaiG---SGT 365
gi 120320    279 WVDAYNSLVDTFSSLTKy-----------------Tave-pgeEASDKNGALLGDSVVRTIQTGIRAQFAN--SGS-NSA 337
gi 9911074   278 WVNAYNSLIDTFSSLTKYt----------------Avda-gadSQSSSNGALLGDSTLRTIQTQLKSMLSN--TVS-SSS 337
gi 502949001 307 WVDSYNELQTTFDSLTKFkpvg------------------kgeAASKDNGALLGDGTLKGIQSQLRHQLFA--AQD-VAD 365
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18203159  377 -----------FSSITQIGITTSSDyr-------lgGFLEVDEDKLRAALEADPDSVHQLLNGTanssltsipvkdrtSQ 438
gi 13124751  545 -----------VESLMKYGLSLDDK-----------GVMSLDEAKLSSALNSNPKATQDFFYGS--------------DS 588
gi 18203355  366 dangnkvntkvMLSMQDFGLSLNDA-----------GTLSFDSSKFEQKVKEDPDSTESFFSN---------------IT 419
gi 18202218  577 -----------SRTLAHIGISTKAHassgintaqlrGYLEIDEEKLHSSLNAQKDQVRALFGHD--------------SD 631
gi 18202049  525 -----------FSIINQMGVFTNSIsssg----glsRYLRLDEKKFDESIRNNIDNVRELFLYD--------------LN 575
gi 81741859  375 -----------IIFIEDVGIKINPKn----------GNLILDNDKLIKNMQNNWKNLRNFFL------------------ 415
gi 81592031  366 -----------YQSMGSIGVTMGSD-----------GTLSIDDTKLSAAIAASPSQVASLFAGA--------------GT 409
gi 120320    338 -----------FKTMAEIGITQDGTs----------GKLKIDDDKLTKVLKDNTAAARELLVGD--------------GK 382
gi 9911074   338 -----------YKTLAQIGITTDPSd----------GKLELDADKLTAALKKDASGVGALIVGD--------------GK 382
gi 502949001 366 -----------IATLNKLGIKQKLD-----------GTLEISDEKLEKNLKEKPANVKAFFMGD--------------GE 409
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18203159  439 qr--sEIysQTGLVGR--------------IRSSLSSTMndivaRAGNERRTEQQFTIGRQILDVDKRIDHFQQRLIQie 502
gi 13124751  589 kdmggREihQEGIFSK--------------FNQVIANLI-----DGGNAKLKIYEDSLDRDAKSLTKDKENAQELLKT-- 647
gi 18203355  420 ky--eDInhTGEVIKT----------------GSLSKYL-----NSNGGNTNGLEFKPGDFTIVFNNQTYDLSKNSDGtn 476
gi 18202218  632 gd--lLV--DNGVAFT--------------LTELLNPYL-----GRS-GIFAIRSNGVDERIKSTEKRVETYDKQLEKke 687
gi 18202049  576 gd--rVY--DNGIAKM--------------LGDCLSPLV-----ASG-GVIYNKIKNYDLKIFNQKNKVEDYKKKYEDre 631
gi 81741859  416 ---------KSNFISD--------------ISSFIEDNIykkgtINSNKSIISEINNLNKQKKIINKEIEKSEMLSYNki 472
gi 81592031  410 at--dALvsVPSFSDStqagtyavnvtqlaTQGSLKGSA-----AANTTITQGANDTLAITVSNITTNITVPAGSYTAss 482
gi 120320    383 ---------ETGITTK--------------IATEVKSYL------ADDGIIDNAQDNVNATLKSLTKQYLSVSNSIDEtv 433
gi 9911074   383 ---------KTGITTT--------------IGSNLTSWL-----STT-GIIKAATDGVSKTLNKLTKDYNAASDRIDAqv 433
gi 502949001 410 ---------KTGFATQ--------------TYNLLKETL-----DGHEGTIATATEGINKRLKTLERQVEQTNRNIDAtm 461
                        330       340
                 ....*....|....*....|.
gi 18203159  503 nrywaQ--FSrmeqmmnQANA 521
gi 13124751  648 -----R--YN-------IMAE 654
gi 18203355  477 fkltgKteEEllqnlanHINS 497
gi 18202218  688 relrhK--YHtmdgalrSLQK 706
gi 18202049  632 rkvegE--LNtldftvkRMKD 650
gi 81741859  473 nmykeQ--FKkldlfmsKTDY 491
gi 81592031  483 l--aaQ--IQsqlnastGLQN 499
gi 120320    434 arykaQ--FTqldtmmsKLNN 452
gi 9911074   434 arykeQ--FTqldvlmtSLNS 452
gi 502949001 462 erykrQ--FTeldklvnSLNN 480
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