Conserved Protein Domain Family
FliD_C

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pfam07195: FliD_C 
Flagellar hook-associated protein 2 C-terminus
The flagellar hook-associated protein 2 (HAP2 or FliD) forms the distal end of the flagella, and plays a role in mucin specific adhesion of the bacteria. This alignment covers the C-terminal region of this family of proteins.
Statistics
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PSSM-Id: 311255
View PSSM: pfam07195
Aligned: 26 rows
Threshold Bit Score: 127.438
Threshold Setting Gi: 81737786
Created: 27-Mar-2017
Updated: 23-May-2017
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9K6W0       237 GTNAEVEFIDpimsSePIVVSDSrTNRVTVGGITFSL----------------TGTTEGFE--TLNVSSNTDAAFEKVME 298 Bacillus halodu...
P96786       433 ASDSAFTYNG----V-SITRPTN-EVNDVISGVNITL----------------EQTTEPNKpaIISVSRDNQAIIDSLTE 490 Helicobacter py...
Q9PHW6       256 AQNAEFTLDG----I-KMFRSSN-TVTDLGVGMTLTL----------------NKTGe----iNFDVQQDFEGVTKAMQD 309 Campylobacter j...
O83842       449 AQDAAFDFDG----V-HVTRGTN-SITDLIPGVTLSL----------------HERTEKTE--TLSVTPDVNAMKNAIIE 504 Treponema palli...
O51173       391 AENAKIKFDG----V-DVERDSN-VINDLVPNVTLSL----------------KKPSSDMV--EAKIEPDYEGIKRVLLD 446 Borrelia burgdo...
Q8D3D8       242 SDNSIIKVDN------NLYYRKTnIIRDVLKNVTLNLkkts---------kesSKNLEDGE--TLSFYFNKEKFLKFFKD 304 Wigglesworthia ...
Q8XST4       258 GQNALATVNG----I-AVQSPTN-TLSNVVDGTSLTL----------------SKIGs----tMVSVANDSTSTTTGVVN 311 Ralstonia solan...
P16328       224 AENAKLNVNG----I-DIERQSN-TVTDAPQGITLTL----------------TKKV-TDA--TVTVTKDDTKAKEAIKS 278 Salmonella ente...
P24216       222 AQNAQLTVNN----V-AIENSSN-TISDALENITLNL----------------NDVTTGNQ--TLTITQDTSKAQTAIKD 277 Escherichia col...
WP_013183977 233 AANAKLTVNG----I-PIERQTN-EIKDAPEGIILNLkkvseteevivkvngeDKKIPRPKteTLVVSRDIEPMKEAIKK 306 Xenorhabdus nem...
Q9K6W0       299 FVDTYNATITELRSLLSEpryrdypplteeqrrelSereaelwDEKAKSGLLRNDSMLNSLLAQMRADLYA--PVQtNGQ 376 Bacillus halodu...
P96786       491 FVKAYNELIPKLDEDTRY-----------------D-------ADTKIAGIFNGVGDIRAIRSSLNNVFSY--SVHtDNG 544 Helicobacter py...
Q9PHW6       310 LVDAYNDLVTNLNAATDY-----------------N-------SETGTKGTLQGISEVNSIRSSILADLFDsqVVDgTTE 365 Campylobacter j...
O83842       505 FVAKYNRLMAEINIVTSNksaii-------delayLtpe-ekkKETEQLGSLHGDSTLLMLKDRLRRNTSNayRAGdDGA 576 Treponema palli...
O51173       447 FIGAYNEVLAEINIVSSNedqpnnqksniveeltyLsds-qkeEAYKNLGILRSEFLLKNLKSKLESIIFKpyVTS-DPN 524 Borrelia burgdo...
Q8D3D8       305 FVKSFNLFINESNKLREFeineksi---spyqkrnD-------KLLYNIGPFIGDYLLNNITNKLKFLIRKnfDDYkNKN 374 Wigglesworthia ...
Q8XST4       312 FVKAYNALRISLNSLTNid-----------------------tSNSANNGALASDVSTKTLINQITDVLGQaiG---SGT 365 Ralstonia solan...
P16328       279 WVDAYNSLVDTFSSLTKy-----------------Tave-pgeEASDKNGALLGDSVVRTIQTGIRAQFAN--SGS-NSA 337 Salmonella ente...
P24216       278 WVNAYNSLIDTFSSLTKYt----------------Avda-gadSQSSSNGALLGDSTLRTIQTQLKSMLSN--TVS-SSS 337 Escherichia col...
WP_013183977 307 WVDSYNELQTTFDSLTKFkpvg------------------kgeAASKDNGALLGDGTLKGIQSQLRHQLFA--AQD-VAD 365 Xenorhabdus nem...
Q9K6W0       377 -----------FSSITQIGITTSSDyr-------lgGFLEVDEDKLRAALEADPDSVHQLLNGTanssltsipvkdrtSQ 438 Bacillus halodu...
P96786       545 -----------VESLMKYGLSLDDK-----------GVMSLDEAKLSSALNSNPKATQDFFYGS--------------DS 588 Helicobacter py...
Q9PHW6       366 dangnkvntkvMLSMQDFGLSLNDA-----------GTLSFDSSKFEQKVKEDPDSTESFFSN---------------IT 419 Campylobacter j...
O83842       577 -----------SRTLAHIGISTKAHassgintaqlrGYLEIDEEKLHSSLNAQKDQVRALFGHD--------------SD 631 Treponema palli...
O51173       525 -----------FSIINQMGVFTNSIsssg----glsRYLRLDEKKFDESIRNNIDNVRELFLYD--------------LN 575 Borrelia burgdo...
Q8D3D8       375 -----------IIFIEDVGIKINPKn----------GNLILDNDKLIKNMQNNWKNLRNFFL------------------ 415 Wigglesworthia ...
Q8XST4       366 -----------YQSMGSIGVTMGSD-----------GTLSIDDTKLSAAIAASPSQVASLFAGA--------------GT 409 Ralstonia solan...
P16328       338 -----------FKTMAEIGITQDGTs----------GKLKIDDDKLTKVLKDNTAAARELLVGD--------------GK 382 Salmonella ente...
P24216       338 -----------YKTLAQIGITTDPSd----------GKLELDADKLTAALKKDASGVGALIVGD--------------GK 382 Escherichia col...
WP_013183977 366 -----------IATLNKLGIKQKLD-----------GTLEISDEKLEKNLKEKPANVKAFFMGD--------------GE 409 Xenorhabdus nem...
Q9K6W0       439 qr--sEIysQTGLVGR--------------IRSSLSSTMndivaRAGNERRTEQQFTIGRQILDVDKRIDHFQQRLIQie 502 Bacillus halodu...
P96786       589 kdmggREihQEGIFSK--------------FNQVIANLI-----DGGNAKLKIYEDSLDRDAKSLTKDKENAQELLKT-- 647 Helicobacter py...
Q9PHW6       420 ky--eDInhTGEVIKT----------------GSLSKYL-----NSNGGNTNGLEFKPGDFTIVFNNQTYDLSKNSDGtn 476 Campylobacter j...
O83842       632 gd--lLV--DNGVAFT--------------LTELLNPYL-----GRS-GIFAIRSNGVDERIKSTEKRVETYDKQLEKke 687 Treponema palli...
O51173       576 gd--rVY--DNGIAKM--------------LGDCLSPLV-----ASG-GVIYNKIKNYDLKIFNQKNKVEDYKKKYEDre 631 Borrelia burgdo...
Q8D3D8       416 ---------KSNFISD--------------ISSFIEDNIykkgtINSNKSIISEINNLNKQKKIINKEIEKSEMLSYNki 472 Wigglesworthia ...
Q8XST4       410 at--dALvsVPSFSDStqagtyavnvtqlaTQGSLKGSA-----AANTTITQGANDTLAITVSNITTNITVPAGSYTAss 482 Ralstonia solan...
P16328       383 ---------ETGITTK--------------IATEVKSYL------ADDGIIDNAQDNVNATLKSLTKQYLSVSNSIDEtv 433 Salmonella ente...
P24216       383 ---------KTGITTT--------------IGSNLTSWL-----STT-GIIKAATDGVSKTLNKLTKDYNAASDRIDAqv 433 Escherichia col...
WP_013183977 410 ---------KTGFATQ--------------TYNLLKETL-----DGHEGTIATATEGINKRLKTLERQVEQTNRNIDAtm 461 Xenorhabdus nem...
Q9K6W0       503 nrywaQ--FSrmeqmmnQANA 521 Bacillus halodurans C-125
P96786       648 -----R--YN-------IMAE 654 Helicobacter pylori 26695
Q9PHW6       477 fkltgKteEEllqnlanHINS 497 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
O83842       688 relrhK--YHtmdgalrSLQK 706 Treponema pallidum subsp. pallidum str. Nichols
O51173       632 rkvegE--LNtldftvkRMKD 650 Borrelia burgdorferi B31
Q8D3D8       473 nmykeQ--FKkldlfmsKTDY 491 Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis
Q8XST4       483 l--aaQ--IQsqlnastGLQN 499 Ralstonia solanacearum
P16328       434 arykaQ--FTqldtmmsKLNN 452 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
P24216       434 arykeQ--FTqldvlmtSLNS 452 Escherichia coli K-12
WP_013183977 462 erykrQ--FTeldklvnSLNN 480 Xenorhabdus nematophila
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