2DR3,2ZTS


Conserved Protein Domain Family
ATPase

?
pfam06745: ATPase 
Click on image for an interactive view with Cn3D
KaiC
This family is in the P-loop NTPase superfamily and is found in archaea, bacteria and eukaryotes. More than one copy is sometimes found in each protein. This family includes KaiC, which is one of the Kai proteins among which direct protein-protein association may be a critical process in the generation of circadian rhythms in cyanobacteria.
Statistics
?
PSSM-Id: 284219
View PSSM: pfam06745
Aligned: 28 rows
Threshold Bit Score: 203.246
Threshold Setting Gi: 74513577
Created: 20-Jul-2016
Updated: 4-Aug-2016
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
2DR3_A   5 VKTGIPGVDEIL-H-------------GGIPERNVVLLSGGPGTGKTIFSQQFLWNG-LKmGEPGIYVALEEHP----VQ 65  Pyrococcus horikoshii...
O29463  20 IPTGTK-LDELFyKvekegdryvrkplGGIPHLAVMNITGVPDTGKSLLAEQFAITQaGS-GYRVLYVTVESPAnflyTA 97  Archaeoglobus fulgidus
O29896   2 LKTGIEGLDAIL-G-------------GGIPEGHIVAVVGQYGTGKTTLGLHFIYEGlKN-GEACMIISFDEDE----ES 62  Archaeoglobus fulgidus
O29797   4 VKTGIEGFDDIF---------------GGFYRGQIILIAGNPGSGKTTFCAKFLYEGaRRfGENGLYISIGESK----EE 64  Archaeoglobus fulgidus
Q8ZYK9  11 VPTGIEGLDTII-G-------------GGFIRGRTYLISGETGTAKTLTALTFLIQGaLKyGEPGIYISVDETY----EQ 72  Pyrobaculum aerophilum
Q8ZT96  22 APTGIWYIDQLL-Q-------------GGFRKGEIYLVAGEAGQGKTIFSLQFLKTGaELyDEPGLYITIDEPS----ED 83  Pyrobaculum aerophilum
Q8TN49   4 VSTGIEELDRKL-I-------------GGYPVNKAILITGVAGSGKTIFGIHFIYRScVE-GRKCLMIATEETP----ED 64  Methanosarcina acetiv...
O27542   7 LKIGINGLDDH----------------RRFPMGRSVLITGEPGCGKTIFGLRFAISScME-GYNTVYITAEEDA----ND 65  Methanothermobacter t...
O26539   8 TGTGIKGLDDII---------------GGYPQGRSILVTGDPGSGKTIMGLQFAIQSaRS-GLKTIYITTEEDE----TD 67  Methanothermobacter t...
O66582  38 VPTGVEGLDELFfKseiregkvvkvplGGIPRYSVTNITGVSDTGKSLMVEQYTVKQaER-GEPVAFITVESPApfvtMG 116 Aquifex aeolicus
2DR3_A  66 VRQNMA-QFGWDVKPYEEKgmFAMVDAFTAGIGkskeyekyivhdLTDIREFIEVLRQAIRDINA--KRVVVDSVTTL-- 140 Pyrococcus horikoshii...
O29463  98 MKERSE-AMGVDFTKVESN--VVVIDASESDEL------------RENPKALMETMAYAIKEKKV--TNTIIDSITGL-- 158 Archaeoglobus fulgidus
O29896  63 IIGDAK-SVGMDLTAFGDKvhIVRLEASEV---------------KKSLEKLESDLPEIVRSLGV--SRMLVDSISVL-- 122 Archaeoglobus fulgidus
O29797  65 FYEYMK-KLGMDFEKLEKTgsFKYVEMLAPTS-------------EDALMQLSRELTKNALELKA--TRIVIDSISPI-- 126 Archaeoglobus fulgidus
Q8ZYK9  73 FVEGAR-RFGWDIEDLRARglIEVLVPEMDIVErire-----kdpTAIAKSLVVSIREYVAALNA--QRLVIDPIAPLvs 144 Pyrobaculum aerophilum
Q8ZT96  84 VKRGVReSLGWDLDALESQnkLVFLDLRTHFRTyake-----ekvTADPREIAKIIMEYVKKFGI--KRLVIDPIAPLii 156 Pyrobaculum aerophilum
Q8TN49  65 ILYQAQ-MLGHDLKPYYESgqLTIENIFESRSEsigq-----tryGFKPESLDIELPNLMEFIREgtECLVIDNLGTFa- 137 Methanosarcina acetiv...
O27542  66 LHIQAN-SFGWNTQELEEKglLNFIELTGIRARite------aelSMDMDPMKGNFTKIIHDIPPeaEVVVIDSLGGYt- 137 Methanothermobacter t...
O26539  68 LRIQCA-SLGWDITDLLESgkLSIIGLSAMRARlte------aeiSIGIESVKGNLRKILAEIPDdtEVLIIDSIGSHt- 139 Methanothermobacter t...
O66582 117 LRERAT-AMGVDFDKIKDK--IILIDAASHATL------------RENIPNLLATLAHVIKTYKV--KHTIIDSVTGL-- 177 Aquifex aeolicus
2DR3_A 141 YINKPAM-ARSIILQLKRVL-AGTGCTSIFVSQVSV-----GERGFGGPGVEH-GVDGIIRLDLDEIDG----------- 201 Pyrococcus horikoshii...
O29463 159 YEHKEMM-ARQIVRQFFNFM-KKYRQTGIFVSQKRSaqaseSAEAAGGLAVAH-IVDGTIVLDKKLIESrwdvslyglpl 235 Archaeoglobus fulgidus
O29896 123 ETLFDDA-GRYSMLAAFRKMlKENGITAIITSEADK-----YQPNTSKYGILEyICDGMISLKVVRKSEl---------- 186 Archaeoglobus fulgidus
O29797 127 LSMNPET-ARAILHNALKTIsRELKSVVLMTEEMPIg------ETRIGQGIEEfVVDGVIVLRLEVPEAg---------- 189 Archaeoglobus fulgidus
Q8ZYK9 145 LDKDVQV-LREYIRVLVMSIeREIGTTNIITTEIPS-----GSGAISRYGVEEfLATGVFIMGIAKARDg---------- 208 Pyrobaculum aerophilum
Q8ZT96 157 TSHTDVLwVREYMRELVFQLrKMKDITTLMTSEIPT-----GENKISRFGVEEyLASGVIKLELMEYRG----------- 220 Pyrobaculum aerophilum
Q8TN49 138 LRVSKKK-LRDQFDGLAYLV-RKKGCTTLLIMD--------ESAYNLTHQLAEySVYGSIRLLVKENAYl---------- 197 Methanosarcina acetiv...
O27542 138 AKLTAYE-FRNQFDLLVYEL-KQRGITSVIILD--------SATSKEFNELALfSVYGAIKLGRRENPYt---------- 197 Methanothermobacter t...
O26539 140 EKLTTDE-FRDQFDLLIYEL-KKRDITAMIILD--------SATSEEFNDIALySVYGAIRLIKRENPYt---------- 199 Methanothermobacter t...
O66582 178 YEAKEML-ARTIVRQLFNFM-KKWYQTALFVSQKRSsheelSAEAAGGFAISH-IVDCTMVLAKELIMTkyqaqiykkei 254 Aquifex aeolicus
2DR3_A 202 -ELKRSLIVWKMRGTSHSMRRHPFDITD-KGIIVYPDKV 238 Pyrococcus horikoshii OT3
O29463 236 gSILRTIRIDGCRIAPHDSRVWVFEISEiGTIEIIAPLS 274 Archaeoglobus fulgidus
O29896 187 dEPTLGLEVVKMRRVKHSRKPKPYIITD-SGIVVYEEAE 224 Archaeoglobus fulgidus
O29797 190 -APVRTMSVLKLRGKPLDRAVYNFEIGPpSGVRVLMHGI 227 Archaeoglobus fulgidus
Q8ZYK9 209 -SFKRVMFVRKMRWSPVHPGIYEIEIIPkAGIVVKGQVK 246 Pyrobaculum aerophilum
Q8ZT96 221 -FVFRVMFIRKMRWTAVRPQKLVFEIYPhYGIYILDRLE 258 Pyrobaculum aerophilum
Q8TN49 198 gKMERYLCIPKMRSTPISPDMSIFEIAS-EGIKIHEPDG 235 Methanosarcina acetivorans
O27542 198 gRRERIMDIVKMRSTKTPLQFLTYEIGGeEGITITEGEE 236 Methanothermobacter thermautotrophicus str. Delta H
O26539 200 gRRERVMDIIKMRSTRTPIEFIPYIISD-SGLEVIENPE 237 Methanothermobacter thermautotrophicus str. Delta H
O66582 255 gDIVRLFRIDGCRLCGHDTKTHFMEITEtGLVKIGPPLR 293 Aquifex aeolicus
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap