5WRH


Conserved Protein Domain Family
Flg_bbr_C

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pfam06429: Flg_bbr_C 
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Flagellar basal body rod FlgEFG protein C-terminal
This family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which pfam00460 is often present at the extreme N-terminus.
Statistics
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PSSM-Id: 336403
View PSSM: pfam06429
Aligned: 454 rows
Threshold Bit Score: 27.6194
Threshold Setting Gi: 81599923
Created: 21-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5WRH_A        182 TGLE---SIGENL-YIETQssGAPNESTpglNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKL 257
gi 123776788  394 SELE---NAENTL------------------NQAT---RYHESFSGVNNDEEAMNLMEYQRAYQSNMKVIATGDKLFSDL 449
gi 81556385   363 NALDseyEVEKAL-Y------DS-------------LEKKILERQGVSIDQEFMEIMQIQKNYEAVAKILPRIDEMFRTL 422
gi 81599923    37 NDVQ---QQSNAVaN------GA--QAA---TETAS--ETSQSVTAANTTDSLVSLNQGQTNFESNTRTVETADEMLGTM 100
gi 814505518  170 VASD---KSEVNG-YQKIH--GDLLEGI---------QQEKMSIEGVNMEEEMVNLMAFQKYFVANSKAITTMNEVFDSL 234
gi 1141162886 274 TMMG---KVGAAS-QQNKQakGAAEAVR---GQAEl---dWYSVSGVDRDEEVMNMLRFKDMYNANMKVIAVASELFETT 343
gi 975390042   23 TEVD----AASNV-YSAAQ------------NQQSSV-------SGVSMDEEAVNLITYQQIYEANLKVISAGAEIFDSV 78
gi 146400810  421 SAAL---TQVSNV--------GN--LVT-------ALKAQASSTSGVNIDQQMSLLVTLQNAYAANAKTVTIAQQMWQAV 480
gi 85826032   409 SD-----SANNMLsY----------AAT---SYTE-LAQAEL-ALGVDSDAELQNMMLIENAYAANAKMLSAIDEMMQTL 468
gi 500072964  422 NRIR---SEASAL--QSSS------------HQSG-L-KAALLAEGVDSDKEMESLLALERAYAANAKVFQTANDMLDAI 482

                  ...
5WRH_A        258 TQL 260
gi 123776788  450 LAL 452
gi 81556385   423 LNM 425
gi 81599923   101 IDT 103
gi 814505518  235 FSI 237
gi 1141162886 344 LNS 346
gi 975390042   79 LEM 81
gi 146400810  481 QAM 483
gi 85826032   469 LRM 471
gi 500072964  483 LRL 485
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