Conserved Protein Domain Family
FlaC_arch

?
pfam05377: FlaC_arch 
Flagella accessory protein C (FlaC)
Although archaeal flagella appear superficially similar to those of bacteria, they are quite distinct. In several archaea, the flagellin genes are followed immediately by the flagellar accessory genes flaCDEFGHIJ. The gene products may have a role in translocation, secretion, or assembly of the flagellum. FlaC is a protein whose exact role is unknown but it has been shown to be membrane-associated (by immuno-blotting fractionated cells).
Statistics
?
PSSM-Id: 310169
View PSSM: pfam05377
Aligned: 28 rows
Threshold Bit Score: 49.4805
Threshold Setting Gi: 500835847
Created: 20-Jul-2016
Updated: 4-Aug-2016
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 3023755    10 KVNDIESKLPKLES---SINNLRKENEMLRVELNKINENL----QDIMALYEVVSN-QIN---PFI 64
gi 74544342   49 RMTKIENDLGKLSG---EMEGQKKTLNDIKNELEGIKENV----KMVVSLYELVSR-DFN---PFM 103
gi 494973357 126 RIETLEEELERNGT---RLGSIRDAQESVSDDIEEVNDTV----RRLLGVYDRLTE-QVN---PFt 180
gi 530556068  59 RMGNMENEVGKMST---LLESLKRGFQESGDKLTMISENV----KMVVSLYEVVSK-DFN---PFl 113
gi 530561259  51 RIGNVENELSKLGV---SMDGVKRNISEMNTELETLKENV----KMVVSLYEMVSK-KFN---PFM 105
gi 502709370 103 RIEELEEELQDKET---ELGSVQDSQQHVAEQVEEMNDRV----QRLLGVYDQVTD-DVN---PFt 157
gi 505134449 140 rTESLEESIEDTEM---RLDAIQDSQEQVVSQVDELNDRV----RRLLGLYDQVTD-DIN---PFt 194
gi 490171336  50 RLSEVENEVPRIKI---SIDTLKKQFQEVREDIERLEKTI----KDIMMLYEVISQ-EIN---PFK 104
gi 502730967  47 RLNEIENRLPRIDV---SISNLKREIDGLKENIQKLEDSI----KDMMALYEVVSA-QIN---PFV 101
gi 500835847 104 KVDELEQKMNNLSTvpgELATAEAQLSELSKSVEMLKQTVnihdKDVIKLYETVANlQKNydaKFV 169
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap