1WII


Conserved Protein Domain Family
Elf1

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pfam05129: Elf1 
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Transcription elongation factor Elf1 like
This family of short proteins contains a putative zinc binding domain with four conserved cysteines. ELF1 has been identified as a transcription elongation factor in Saccharomyces cerevisiae.
Statistics
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PSSM-Id: 336020
View PSSM: pfam05129
Aligned: 147 rows
Threshold Bit Score: 52.948
Threshold Setting Gi: 122017964
Created: 23-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1WII_A         8 RKP-PpkKKMTG-T-LETQFTCPFCNHEkS-CDVKMDRAR---N--TGVISCTVCLEEF--Q--TP-ITYLSEPVDVYSD 73  house mouse
Q4D0K5         6 KKTaVpiKKESK-YkIPARFDCPLCDAKnS-IAVRLVRSS---G--SARLHCRSCRAGA--GkeFP-FLPLEKPVDVFFR 75  Trypanosoma cruzi
Q4GZ56         6 KKAtVpiKKESK-YkIPSHFDCPFCDAKkS-IAVRLKRSD---G--LASVHCRVCRVGE--NrhYN-FSPLEKPVDVFFR 75  Trypanosoma brucei
Q4QCV8         7 KSNnGpvKKESK-YkIPTRFDCPLCDAKaS-IVVRMFRAT---S--DATVQCRVCGAGG--TkrWN-VLRLEKPVDVFFR 76  Leishmania major
CCD13862       6 KKAaVpiKKESKyK-IPSLFDCPLCDAKkS-IAVKMKRNI---G--CAVVRCRMCHAGDrkE--YP-ILPLEKAVDVFFR 75  Trypanosoma con...
WP_012022214   7 KRTk--iVRVKP-Q-IPKTFECPRCG-KiA-ITIKFDKSDsgpR--TAHIKCGSCGLST--D--LEgLPPVYDEANVYGK 74  Metallosphaera ...
WP_012310169   6 RRTiTpvRRRRK----SAFLRCPSCQHn-S-ITVEVSKKD---G--KAIIRCYNCGLVR--E--IE-MKPGEGKIDAYTR 69  Candidatus Kora...
WP_013775589   7 KRTk--iIKPKP-K-LPKTFECPRCGRI-A-ISVEIKNG-------IAHIKCGNCGLSA--D--IE-VPPVFDEANAYGK 68  Acidianus hospi...
AFH42851       8 RKRq--qLKKPV-RkIPKIFVCPHCSKEsLrIVIRPKQGE---DkaIAEASCGECGFCA--R--FY-VPNIFEPVNAYGK 76  Fervidicoccus f...
BAJ48193       7 Ki-----IKRTP-RpFPKVFSCPLCGAT-A-VRVVHEKKS---E--TATVTCGNCNASA--E--IP-WYPAYSEVDVYTK 68  Candidatus Cald...
1WII_A        74 WIDACE 79  house mouse
Q4D0K5        76 FREELM 81  Trypanosoma cruzi
Q4GZ56        76 FREELM 81  Trypanosoma brucei
Q4QCV8        77 FHEALV 82  Leishmania major
CCD13862      76 FREELM 81  Trypanosoma congolense IL3000
WP_012022214  75 FLDLYL 80  Metallosphaera sedula
WP_012310169  70 FFDAFI 75  Candidatus Korarchaeum cryptofilum
WP_013775589  69 FIDLYL 74  Acidianus hospitalis
AFH42851      77 VIDLYD 82  Fervidicoccus fontis Kam940
BAJ48193      69 WYDIVT 74  Candidatus Caldiarchaeum subterraneum
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