2FWR


Conserved Protein Domain Family
ResIII

?
pfam04851: ResIII 
Click on image for an interactive view with Cn3D
Type III restriction enzyme, res subunit
Statistics
?
PSSM-Id: 309815
View PSSM: pfam04851
Aligned: 52 rows
Threshold Bit Score: 66.5416
Threshold Setting Gi: 74581138
Created: 21-Jul-2016
Updated: 4-Aug-2016
Structure
?
Program:
Drawing:
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2FWR_C        91 EISLRDYQEKALERWL----------------------------------VDK----RGC-IVLPTGSGKTHVA-MAAIN 130
gi 20141751    5 LLEELPHQEQALAAILasftgidhaqadh---------nhyanplikeryDDK----ANIdVKMETGTGKTYVY-TRLMY 70
gi 81845493  256 FLDLNQEQAKVVKIVVdqi----------------------------gkeQNK----PFL-LEGITGSGKTEVY-LHIID 301
gi 81853924  261 SLQLLPDQALACEKIIaa-------------------------------tEQE----TFL-IHGVTGSGKTEIY-LQTIE 303
gi 81584558   12 RLSLRPPQAESLTRLRqaldaapemlgherdvsailatlkaefptladfeREF----PSLcFALATGVGKTRLM-GAFIA 86
gi 81742972  109 TF-IYLYELRRVRNVAellfefgdqql-------------adlafgippeQDRw--aRYC-AKIATGAGKTKIMsLAIVW 171
gi 75393479   42 KKELRDYQKQAIYNYLekrq---------------------------snpTQK----HFM-FEMATGSGKTLVM-AGLIL 88
gi 1175414    47 KYPFFEWQKSALENFLifdrtskl------------------kdfpdiknRPT----HLL-FNMATGAGKTMMM-AALIL 102
gi 81532953   51 KIELRKYQEEALKNFLiyydsd-----------------------tlkknKQI----HTL-FHMATGSGKTIIM-ASLIL 101
gi 74581138   59 EFNFHEGQWQAILNTIyiheilklksvgeiym--siypdlvqqmdlldlkRDKyehpKYC-IKMATGTGKTWVLdALLIW 135
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2FWR_C       131 ELST-------------PTLIVVPTLALAEQWK---------ERL---------------------GIFGEE-------- 159
gi 20141751   71 ELHQkyg--------lfKFVLVVPTPAIKEGARnfitsdyarQHF---------------------SQFYENtr------ 115
gi 81845493  302 NVLKlg----------kTAIVLVPEISLTPQMT---------NRF---------------------ISRFGKqva----- 336
gi 81853924  304 AKLKeg----------kEAIVLVPEISLTPQMV---------ERF---------------------KSRFGSeva----- 338
gi 81584558   87 YLHLahg--------inNFFVLAPNLTIYNKLI---------ADF---------------------TCNTPKyvf----- 123
gi 81742972  172 SYFHslyepn--sdlarHFVVIAPNLTVYERLK---------DDF---------------------ENCAIFyad----- 214
gi 75393479   89 ECYKqg---------yqNFIFFVNSTSILEKTK---------LNF---------------------TDSASSkyl----- 124
gi 1175414   103 YYFEkg---------yrHFLFFVNQNNIVDKTE---------NNF---------------------TDPTHAkf------ 137
gi 81532953  102 HLYTkg---------yrKFLFFVNQTNVLEKTI---------ENF---------------------TNTLSTkyl----- 137
gi 74581138  136 QYLNsrheesesgeysrNFLLVAPGIIVYERLL---------DAFlgkrkedgsrdfeqsdfrnfeKLFIPPaykdelfg 206
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2FWR_C       160 -----------YVGE-------FSGRIKEL----------------KPLTVSTYDSAYVNA------------------- 186
gi 20141751  116 ---------meLCTInagdfkvKSGRKNFPaqllsftdasrrdshtIQVLLINAQMLNSASmtrdd-------------- 172
gi 81845493  337 ---------imHSGL-------SEGEKFDEwrki--------ksgqAKVVVGARSAIFAPL------------------- 373
gi 81853924  339 ---------vlHSAL-------SSGEKYDEwrki--------erkeARVVVGARSAVFAPF------------------- 375
gi 81584558  124 ---------kgIAEFaqqppliITGDNYDQtgaavddq-smgfahdVRINIFNISKINSEVrggkepr------------ 181
gi 81742972  215 ---------plIPEE-------WRPDFQMQvvlqdep---ggatttGALYLTNIHRLYPSRdnggeaseeevsaifgppv 275
gi 75393479  125 ---------fsENIN-------INDENTEIksinnln---eshsnaINIYFSTIQGLFSLFtkake-------------- 171
gi 1175414   138 ---------lfTEKI-------LQGDTVIPirkvetf---sphsdgIEIKFTSIQKLYNDIhteqe-------------- 184
gi 81532953  138 ---------fnQVIE-------YLGNKIKIkkvnsfs--enkfnddIEIVFTTTQSLHLDLintke-------------- 185
gi 74581138  207 fiqgcvtqkeeIGKK-------VTGDGLIAit-------------nWHLLVEEEESIDADSpldspditvkellpi-apg 265
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2FWR_C       187 ------------EKLGNRFM---------LLIFDEVHHLPA-------------------E--------SYVQ-I----A 213
gi 20141751  173 --------ydqtLLGGLTSPvkglqmtrpVVIIDEPHRFARdn-------------------------kFYRA------I 213
gi 81845493  374 ----------------ENIG---------AIIIDEEHESTYkq---------------esNpr-----yHARD-VallrA 407
gi 81853924  376 ----------------ENLG---------IIIIDEEHEASYkqe--------------dnPryhardvaIWRA------E 410
gi 81584558  182 ------ikrmreVLGDSYFNhlan-lpdlVLLMDESHRYRAq------------------A--------GMRA-I----N 223
gi 81742972  276 vrgraldtgeslRARITAHPr-------lMVLNDEAHHLHDpd-------------------------lAWNRaIdalhE 323
gi 75393479  172 -------naitmEDVKDQKL---------VFLADEAHHLNTetkkk----------lndsEase---krNWES-VvklaL 221
gi 1175414   185 -------nqttlTDLHDLNL---------VMLGDEAHHLNAqtkgkkqgeldlekemndrTskaeierkGWEHmVlellL 248
gi 81532953  186 -------nsityESFENHKV---------VFISDESHHINSltk--------------kaSkdeekaitSWENtV----M 231
gi 74581138  266 tsqghsleeldnQYLRGRELeflaslpdlVVFNDEAHHLGEm------------------KksdevvekKWQE-A----L 322
                        330       340
                 ....*....|....*....|....*
2FWR_C       214 QMS---IA-----PFRLGLTATFER 230
gi 20141751  214 QAI---QP-----QMIVRFGATFPD 230
gi 81845493  408 EYY---KA-----VLLMG-SATPSI 423
gi 81853924  411 KY----QC-----PVVLG-SATPSL 425
gi 81584558  224 EL----KP-----LFGLEVTATPFV 239
gi 81742972  324 ESL---QRgqrglCLQLDFTATPKH 345
gi 75393479  222 EQN---KD-----NLLLEFSATIPN 238
gi 1175414   249 NKNgnpSE-----NVLLEFTATLPE 268
gi 81532953  232 NAFrsnKD-----SIMLEFTATCDL 251
gi 74581138  323 DKI---SEnkkhrFMQVDFSATPYI 344
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap