4BEC,2FZ4


Conserved Protein Domain Family
ResIII

?
pfam04851: ResIII 
Click on image for an interactive view with Cn3D
Type III restriction enzyme, res subunit
Statistics
?
Aligned: 54 rows
Threshold Bit Score: 63.8441
Threshold Setting Gi: 74581138
Created: 6-May-2019
Updated: 18-Jul-2019
Structure
?
Program:
Drawing:
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
4BEC_A  269 LLVMRPYQIAATERIL-----WKIKssfta--------------------knwsKPES----GGY-IWHTTGSGKTLTS- 317  Escherichia coli
P40815    5 LLEELPHQEQALAAIL-----ASFTgidhaqadhn---------hyanplikerYDDK----ANIdVKMETGTGKTYVY- 65   Salmonella enterica...
Q98Q87    5 IMKLTKVQQNAVDDIL-----EQFKinheykkq-------------enqnkydlDKEK----IIQ-FQAPTGSGKTFMM- 60   Mycoplasma pulmonis
O25211  284 KHVWRYAQMFASLNVL-----KELQkhygt--------------------nqnlKDPL----KGI-IWHTQGSGKTALT- 332  Helicobacter pylori
Q82SL1   12 RLSLRPPQAESLTRLR-----QALDaapemlgherdvsailatlkaefptladfEREF----PSLcFALATGVGKTRLM- 81   Nitrosomonas europaea
Q8DIV1  109 TF-IYLYELRRVRNVA-----ELLFefgdqqla-------------dlafgippEQDRw--aRYC-AKIATGAGKTKIMs 166  Synechococcus elong...
Q84HQ5   42 KKELRDYQKQAIYNYL-----EKRQs---------------------------nPTQK----HFM-FEMATGSGKTLVM- 83   Helicobacter pylori
P44105   47 KYPFFEWQKSALENFLifdrtSKLKdfp-----------------------dikNRPT----HLL-FNMATGAGKTMMM- 97   Haemophilus influen...
Q98QG9   51 KIELRKYQEEALKNFLiyydsDTLKk----------------------------NKQI----HTL-FHMATGSGKTIIM- 96   Mycoplasma pulmonis
Q978B6   59 EFNFHEGQWQAILNTIyiheiLKLKsvgeiymsiyp-------dlvqqmdlldlKRDKyehpKYC-IKMATGTGKTWVLd 130  Thermoplasma volcanium
4BEC_A  318 FKAARLATELDFi--------dKVFFVVDRK---DLDYQTM---------KEY---------------------QRFSPD 356  Escherichia coli
P40815   66 TRLMYELHQKYGl--------fKFVLVVPTP---AIKEGARnfitsdyarQHF---------------------SQFYEN 113  Salmonella enterica...
Q98Q87   61 ANFIKRLILNYPn--------eKFVFVIATLssaDLPKQMKen------lDEY---------------------KRYLGN 105  Mycoplasma pulmonis
O25211  333 YHLTKLIRDFFSrsnl--nkktKFYFIVDRL---DLLEQAK---------NEF---------------------LKRGLC 377  Helicobacter pylori
Q82SL1   82 GAFIAYLHLAHGi--------nNFFVLAPNL---TIYNKLI---------ADF---------------------TCNTPK 120  Nitrosomonas europaea
Q8DIV1  167 LAIVWSYFHSLYepns--dlarHFVVIAPNL---TVYERLK---------DDF---------------------ENCAIF 211  Synechococcus elong...
Q84HQ5   84 AGLILECYKQGYq---------NFIFFVNST---SILEKTK---------LNF---------------------TDSASS 121  Helicobacter pylori
P44105   98 AALILYYFEKGYr---------HFLFFVNQN---NIVDKTE---------NNF---------------------TDPTHA 135  Haemophilus influen...
Q98QG9   97 ASLILHLYTK-Gy--------rKFLFFVNQT---NVLEKTI---------ENF---------------------TNTLST 134  Mycoplasma pulmonis
Q978B6  131 ALLIWQYLNSRHeesesgeysrNFLLVAPGI---IVYERLL---------DAFlgkrkedgsrdfeqsdfrnfeKLFIPP 198  Thermoplasma volcanium
4BEC_A  357 Sv----------------nGSEN-------TAGLKRNLdk------------dDNKIIVTTIQKLNNLMka--------- 392  Escherichia coli
P40815  114 Trm---------------eLCTInagdfkvKSGRKNFPaqllsftdasrrdshTIQVLLINAQMLNSASmtrd------- 171  Salmonella enterica...
Q98Q87  106 Yf-----------------ESKV-------IESPSKNRivakdks--yeihaqQNNVFIFGKSSFGKDRilterg----- 154  Mycoplasma pulmonis
O25211  378 Vhe--------------aeNKED-------LSQKLKSSsvfe-------gsqgNDEIIVVNIQKFKAPNeekspnedpsn 429  Helicobacter pylori
Q82SL1  121 Yvf--------------kgIAEFaqqppliITGDNYDQtgaavdd-qsmgfahDVRINIFNISKINSEVrggkep----- 180  Nitrosomonas europaea
Q8DIV1  212 Yad--------------plIPEE-------WRPDFQMQvvlqde---pggattTGALYLTNIHRLYPSRdnggeaseeev 267  Synechococcus elong...
Q84HQ5  122 Kyl--------------fsENIN-------INDENTEIksinnl---neshsnAINIYFSTIQGLFSLFtkake------ 171  Helicobacter pylori
P44105  136 Kfl---------------fTEKI-------LQGDTVIPirkvet---fsphsdGIEIKFTSIQKLYNDIhteqe------ 184  Haemophilus influen...
Q98QG9  135 Kyl--------------fnQVIE-------YLGNKIKIkkvnsfs--enkfndDIEIVFTTTQSLHLDLintke------ 185  Mycoplasma pulmonis
Q978B6  199 AykdelfgfiqgcvtqkeeIGKK-------VTGDGLIAi-------------tNWHLLVEEEESIDADSpldspditvke 258  Thermoplasma volcanium
4BEC_A  393 -----------------esDLPVYNQQV---------VFIFDECHRSQFg------------------E--------AQK 420  Escherichia coli
P40815  172 ---------------dydqTLLGGLTSPvkglqmtrpVVIIDEPHRFARdn-------------------------kFYR 211  Salmonella enterica...
Q98Q87  155 -------------eiqkftSSAINDGFKi--------IYIRDEAHYGSK-------------------KtslkkdetKFE 194  Mycoplasma pulmonis
O25211  430 sa----pkeiisktelqesIQNSRNLQR---------VFIIDEAHRSYD-------------------Pkg-----cFYA 472  Helicobacter pylori
Q82SL1  181 -------------rikrmrEVLGDSYFNhlan-lpdlVLLMDESHRYRAq------------------A--------GMR 220  Nitrosomonas europaea
Q8DIV1  268 saifgppvvrgraldtgesLRARITAHPr-------lMVLNDEAHHLHDpd-------------------------lAWN 315  Synechococcus elong...
Q84HQ5  172 ---------------naitMEDVKDQKL---------VFLADEAHHLNTetkkk----------lndsEase---krNWE 214  Helicobacter pylori
P44105  185 ---------------nqttLTDLHDLNL---------VMLGDEAHHLNAqtkgkkqgeldlekemndrTskaeierkGWE 240  Haemophilus influen...
Q98QG9  186 ---------------nsitYESFENHKV---------VFISDESHHINSltk--------------kaSkdeekaitSWE 227  Mycoplasma pulmonis
Q978B6  259 llpi-apgtsqghsleeldNQYLRGRELeflaslpdlVVFNDEAHHLGEm------------------KksdevvekKWQ 319  Thermoplasma volcanium
4BEC_A  421 N-L----KKKF---KR-----YYQFGFTGTPIF 440  Escherichia coli
P40815  212 A------IQAI---QP-----QMIVRFGATFPD 230  Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Q98Q87  195 N-I----IQN----NA-----YFVIKMTATPNG 213  Mycoplasma pulmonis
O25211  473 N-L----IECD---KT-----AIKIALTGTPLL 492  Helicobacter pylori
Q82SL1  221 A-I----NEL----KP-----LFGLEVTATPFV 239  Nitrosomonas europaea
Q8DIV1  316 RaIdalhEESL---QRgqrglCLQLDFTATPKH 345  Synechococcus elongatus
Q84HQ5  215 S-VvklaLEQN---KD-----NLLLEFSATIPN 238  Helicobacter pylori
P44105  241 HmVlellLNKNgnpSE-----NVLLEFTATLPE 268  Haemophilus influenzae Rd KW20
Q98QG9  228 NtV----MNAFrsnKD-----SIMLEFTATCDL 251  Mycoplasma pulmonis
Q978B6  320 E-A----LDKI---SEnkkhrFMQVDFSATPYI 344  Thermoplasma volcanium
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap