Conserved Protein Domain Family
Baculo_PEP_C

?
pfam04513: Baculo_PEP_C 
Baculovirus polyhedron envelope protein, PEP, C-terminus
Polyhedra are large crystalline occlusion bodies containing nucleopolyhedrovirus virions, and surrounded by an electron-dense structure called the polyhedron envelope or polyhedron calyx. The polyhedron envelope (associated) protein PEP is thought to be an integral part of the polyhedron envelope. PEP is concentrated at the surface of polyhedra, and is thought to be important for the proper formation of the periphery of polyhedra. It is thought that PEP may stabilize polyhedra and protect them from fusion or aggregation.
Statistics
?
PSSM-Id: 309591
View PSSM: pfam04513
Aligned: 23 rows
Threshold Bit Score: 72.0057
Threshold Setting Gi: 147883353
Created: 22-Mar-2017
Updated: 23-May-2017
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
P36865 157 LNGLNQL--CLNHSNHHFELSNILNSIKLQNVNIiNQLSQIFD--DGVLSGLDEKLSRLIADLDG------HFADFGSAL 226 Lymantria dispar mult...
Q1HI51 167 MSNVNQI--NLNQTNQFLELSNMMTGVRNQNVQLlAALETAKDviLTRLNTLLAEITDSLPDLTS------MLDKLAEQL 238 Autographa californic...
Q1HH69 141 VNGVNQI--TLNQSNQFLELSNALCTLRTQNAQIlAAIEASKDeiLTRLKALIDEIKNALPDITL------QLEEFAKEL 212 Antheraea pernyi nucl...
Q91GD9 144 ITGVNQI--SLNQSNQFLELSNMLNALRSQTAQIlTNLENARDaiINRINALVDEIKDALPDQSE------QLQELADKL 215 Epiphyas postvittana ...
P17498 145 VNSLNQI--SLNQSNQFLELSNTLNTVRAQNAQIlAALETTKDaiLTRLNALVDDIKAALPDQSA------QLQELADKL 216 Orgyia pseudotsugata ...
Q9PZ24 161 LADVQQIlaNGGGGGGGCDLTGVLADLQTLLTQV-AALTTTVNtiAGQIDTISTDVGGLVTAVANlstqidNINTSLINL 239 Xestia c-nigrum granu...
Q9WHF1 164 LADIQKLinNGGGGGGNVDLTPILQAI--------AALTTLVNgiQSSVVDLDTSINA-------------RFDTLETRL 222 Agrotis segetum granu...
Q7T5R4 160 LQDLQQLinNGGGGTG-VDLTPVLDAI--------AALSAQVTnlETTLSE----------------------------- 201 Cryptophlebia leucotr...
P87582 161 LLELQQLinNGGGGT--VDLTPVLDAI--------AALATQVTdlQTTLTDLQTALTQLAT----------DVGDLTTNI 220 Cydia pomonella granu...
Q1A4S8 160 LNDVQQIlnNGGG-----DFTTILDAI--------TNLTNLVTnlQNVLNTVTE-----------------DLANLTTNL 209 Choristoneura occiden...
P36865 227 DAALAQLQ---DSLRNDLTNINSILANLTSSLTNINSTINNLLQTLQNL----GLGEVGAKLNDVQSTVDRILGV 294 Lymantria dispar multiple ...
Q1HI51 239 LDAINTVQ---QTLRNELNNTNSILTNLASSVTNINGTLNNLLAAIENLvgggGGGNFNEADRQKLDLVYTLVNE 310 Autographa californica mul...
Q1HH69 213 TDAINGVS---QTLRSELNNTNSILTNLASSITNINGTLNNLLVAVENI-----EGGLSDADRQKLNDVLDLVTE 279 Antheraea pernyi nucleopol...
Q91GD9 216 SDAINAVA---QTLRNEMNNTNSILTNLASSITNINSTLNNLLAAIEGItg-gEGGGLEEADRQNLNSILNLVTE 286 Epiphyas postvittana nucle...
P17498 217 LDAINSVA---QTLRGEMNNTNSILTNLASSITNINSTLNNLLAAIEGIg--gDGGGLGDADRQALNEVLSLVTE 286 Orgyia pseudotsugata multi...
Q9PZ24 240 TVSINALNnsvDIINNRLDTLETNVGSLLASVTNLVNSIAGLVTDVGNI----AHGLAALEATVAANT-----TT 305 Xestia c-nigrum granulovirus
Q9WHF1 223 DTLEQNLNnrlDTFDTRLTALEGQITDLQSDVANILNVLPNLVTTLNAF----TQGVVTQWGEAAWDD-----EA 288 Agrotis segetum granulovirus
Q7T5R4 202 --SIAALNtllQNITQVLTSLTTDVATIVNSLPNVETALSGIITALNAF----INGATLQWGSDTWDTTTYPIEV 270 Cryptophlebia leucotreta g...
P87582 221 DTQLAALTtlvQDLSTAITNLQTDVTTLVNALPNIETALSGMINALNAF----IAGAVAQWGADTWDTGAHPVDS 291 Cydia pomonella granulovirus
Q1A4S8 210 TDAVNSIT-------SVLDNLQRDVTNLN---TNTPLALSSIIAALNAF----ISGSVAQWGADTWDTTTYPVPT 270 Choristoneura occidentalis...
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap