4R4C


Conserved Protein Domain Family
Rep-A_N

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pfam04057: Rep-A_N 
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Replication factor-A protein 1, N-terminal domain
Statistics
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PSSM-Id: 281980
View PSSM: pfam04057
Aligned: 11 rows
Threshold Bit Score: 115.879
Threshold Setting Gi: 75337075
Created: 17-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
4R4C_A         8 LSRGAIAAIMQk---GDTNI-----KPILQVINIRPITTg-----nSPPRYRLLMSDGLNT-LSSfMLATQLNPLVEEEQ 73
gi 2498844     6 LSTGVIARIMH----GEVVD-----APVLQILAIKKINSa-----aDSERYRILISDGKYFnSYA-MLASQLNVMQHNGE 70
gi 2498845     5 LSVGALRIINT----SDASSfp--pNPILQVLTVKELNSnpt--sgAPKRYRVVLSDSINY-AQS-MLSTQLNHLVAENK 74
gi 75333866    5 LTEGVVMKMLNgevtSETDM-----MPVLQVTELKLIQSklhqnqeSSNRYKFLLSDGTDL-AAG-MLNTSLNSLVNQGT 77
gi 82194954    6 LSEGAISAILG----GDSSC-----KPTLQVINIRSINTg-----nGPPRYRLLMSDGLNT-LSSfMLATQLNFLVDNNL 70
gi 75337354    5 LTPNAITAIHD----GDVNL-----KPLLQVLEIKMIGRsq---erSQERYRFLISDGVSA-QHA-MVAVQLNDRVKSGQ 70
gi 75325348    6 LTPNGVAAALA----GDTNL-----KPVLQIVELRGVQVnga-gvtRGERFRAVVSDGTAA-SSA-LFAAQLSDHARSGA 73
gi 122247374   9 VTPGAVAFVLEnaspDAA-TgvpvpEIVLQVVDLKPIGT----------RFTFLASDGKDK-IKT-MLLTQLAPEVRSGN 75
gi 75171651    5 VTPDAISTVLSnpsfDSSSdr---sEIVVQVVDLKPIG----------NRYTFSANDGKTK-VKA-MFTASLTPEIISGK 69
gi 75337075    5 VTQDGIATVLAnqslDSSSVr---pEIVVQVVDLKP----------AGNRYTFSANDGKMK-IKA-MLPATLTSDIISGK 69
gi 519882414   5 LTAGAIGKIMNgevtTEADM-----IPVLQVTDLKQIMAqq---dpTRERFRMVLSDGTYL-HQG-MLGTDLNNLVKEGT 74
                         90       100       110
                 ....*....|....*....|....*....|....*..
4R4C_A        74 LSSNCVCQIHRFIVNTLKd---GRRVVILMELEVLKS 107
gi 2498844    71 LEEFTIVQLDKYVTSLVGkdgaGKRVLIISELTVVNP 107
gi 2498845    75 LQKGAFVQLTQFTVNVMKe----RKILIVLGLNVLTE 107
gi 75333866   78 IQLGSVIRLTHYICNLIQ----TRRIVVIMQLEVIVE 110
gi 82194954   71 LATNCICQVSRFIVNNLKd---GRRVIIVMEMEVLKS 104
gi 75337354   71 FEKGSIVQLIDYICSDVK----GRKLIVVLNMETIVQ 103
gi 75325348   74 LRRGSIVQLSEYVINEVG----PRRIIVILNLEVLVS 106
gi 122247374  76 IQNLGVIRVLDYTCNTIGe--kQEKVLIITKLEVVFk 110
gi 75171651   70 IQNLGLIRLIDFTVNDISs--kSTKYFLVTKCEAVGS 104
gi 75337075   70 IQNLGLIRLLEYTVNDIPgk-sEEKYMLITKCEAVAS 105
gi 519882414  75 LQPGSIVRLTRFVGDVIK----GRRIVIVPQLEVLKQ 107
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