Conserved Protein Domain Family
OmpH

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pfam03938: OmpH 
Outer membrane protein (OmpH-like)
This family includes outer membrane proteins such as OmpH among others. Skp (OmpH) has been characterized as a molecular chaperone that interacts with unfolded proteins as they emerge in the periplasm from the Sec translocation machinery.
Statistics
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PSSM-Id: 335541
View PSSM: pfam03938
Aligned: 628 rows
Threshold Bit Score: 32.9439
Threshold Setting Gi: 123722611
Created: 25-Mar-2017
Updated: 23-May-2017
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81314393   14 LFLFSQCA-GKadnaaapaasgnanatsglKIAYVEVDTLLSQYNFCKDLNADMISKEENSRMVLNQKANELRKSQQEFQ 92
gi 81597007   21 MIAGGLMVsATtam--------------agGVGFANVQDIFETSPLGKAKVT--ADEK-KLKPQMDQLKQNITALQEKVN 83
gi 20139319    6 LLSLMSLSsLPtfaa-----------nstgTIGIVNLRRCLEESALGKKESAEFEKMKNQFSNSMGKMEEELSSIYSKLQ 74
gi 81626529   10 TLFCTFVVsTSafaqt---------tsqplKIGIVNAKKCLDESKLGKQEQANFDKMKKQMESILQDKERDLEELESKIN 80
gi 502947286   6 KFVITGLTaLLfcastpk------leaaaaNIGTVAFRTCVEQSKYGAREQKNFEDLKKQMESVLEEKEKALTEISNKFN 79
gi 493384148  25 APATQDATsGTsfd-------------ktaKIAVVNFKVCIEKSKIGKHEQTVFESLKKQMENSLQEKEKSLNEIAAKLS 91
gi 504262521  16 TIAAAFSLaGIlsmatp--------aqaasDVAVVDVMKTFEETDLGKSIQTHVKRYSQSRANKLKGEQKALQDENNEIR 87
gi 902831466   1 MIAVGLLFsGSfrsa-----------easdVVGVVDVLKAFRQTDLGKSIQSHLKEFEKKKAEGIQAERHELQAEQKRIQ 69
gi 502673220  15 LLIGSIALaQEadskvqp------pqtsstGVATLNVDRLIKEFPGIQDRLEPLRAEAKKLEETIQIRQIELESVQSQLR 88
gi 503380268   6 KVLLPLSAvAAvavatvap----saqtpaqKVGFVDVDRVFAAHPQANAVNTQVKAIEQKANTELGGLRQQMITIAE--- 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81314393   93 kkyESnaF--I----------------SPERAQQeyarLGKLEQDLQA-LQNKlaTEMASENAK-NSQil--rDSINAFL 150
gi 81597007   84 aytQEkdDvqTddskgdtkdaqsadkvENQDKQQaqadLEKAMKDYQNlMNQV--QKMASDDAD-AFK-----DALTKAS 155
gi 20139319   75 ddd--ymEg-----------------lSETAAAElrkkFEDLSAEYNTaQGQYy-QILNQSNLK-RMQki--mEEVKKAS 131
gi 81626529   81 dedYMdsI-------------------SEEAASElkrkKRNLKNEGLQlQNQYi-QTLQQANLK-IVQkl--tDTIAKAS 137
gi 502947286  80 dpdYLdsL-------------------SNEAEAElkhkFRTLSGELQQhQQQYm-QILQQTNFK-IIQgi--tEKVNEAA 136
gi 493384148  92 dpdYVdsL-------------------SNEAENElkhkYRTLNQEITQyQNQYy-QALSQTNMK-IVQql--qELIAKAS 148
gi 504262521  88 qqsGVi---------------------SKDALKAkemeFQQHIDAYKKeARKLq-TEMASET---VVGlrkfiDAENAAA 142
gi 902831466  70 qqmGVi---------------------SKDALKAkelsFQQKVQDYRKkLQKIq-TEVASEN---AVEirkflDALSHAT 124
gi 502673220  89 ktqPGsgE-------------------FVKLQQQ----FLKLNGELQQmVAREr-GNLQMQEAKvLLGv---fREVDDVV 141
gi 503380268  79 ---KGdkA-------------------TAAERQQ----LTQLETTFNSkFQAYg-KQIAQQSAPi-------eTSVDAAI 124
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 81314393  151 KEYNK----TKGYNLIISnt---------------sfDNLlYADStLNITKEIVDGL 188
gi 81597007  156 AQVAK----EKQLDAILPa------------------EMSlYNVDsIDVTKDVIAKM 190
gi 20139319  132 ETVRI----QEGLSVLLNe------------------DIVlSIDSsADKTDAVIKVL 166
gi 81626529  138 SQVAQdttiGQAVDVIFSd------------------EACtYFAPgLDVTDRVVTKM 176
gi 502947286 137 GIVAK----QKGLDLIVNd------------------ESTfFHAAsLDISQDIIKEM 171
gi 493384148 149 ETVAK----EVGVDIVLNe------------------ESSfFYKPeFDLTDKVIDLI 183
gi 504262521 143 KSVAK----KYGFSIVIGehpirmpig--ptppifrgPRFlYINKkNDLTESVIAKI 193
gi 902831466 125 VAVGK----RYGFQVVLAqhpiripmg--pqppsfssPRIlYMNPkADLTESVIQYI 175
gi 502673220 142 KKLAK----ERGYKLVIRqqstsfddeqplpeimktlNRIvFFEEgIDITDDVLAAc 194
gi 503380268 125 SKVAK----ANGYSIVMDrkv-------------aaqGLVvFAENnNDLTDAVIKEV 164
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