1JBI


Conserved Protein Domain Family
LCCL

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pfam03815: LCCL 
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LCCL domain
Statistics
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PSSM-Id: 309078
View PSSM: pfam03815
Aligned: 44 rows
Threshold Bit Score: 90.421
Threshold Setting Gi: 74972930
Created: 25-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1JBI_A           6 ITCFTRGLDIR------------KEKADVLCPGGC--PLEEFSVYGNI--VYASVSSICGAAVHRGVI------------ 57
gi 122052556   751 LDCSDSLGRSKkif------gslNTSVIVRCDEDCs-QKDNLFIYGTNg-LYSDHSSICLAAIHAGII------------ 810
gi 122051822   528 LACNSRITDNSdlp------tkpGSKFNVKCPQNCheTYENYEVEGGKdgLYSFNSSVCLSAVHAGEY------------ 589
gi 74989892    727 LNCDTTLKQAIeie------kfvGNEYLFKCPYDClkRNTEATVIGGEgnIYSEDSSICLSSIHAGVY------------ 788
gi 123286428   137 ISWSDDVDAIGygd-------rvGESVTVTCPADR--FGA-GQVWGTD--VYSSDSPICNAAVHRGLMi----------- 193
gi 123286428    19 LLCATPSLADWsanliargldtpGATGQIECPPN----GAVATVWGTG--TYTSDSSICTAALHYGWIt----------- 81
gi 74989283   1079 LNCSDNLLSERfng-------kiGAQFLVSCLEDC--TNSKYIVKGSNn-YYTPDTSICKAVMHSGIMhktrnthksneh 1148
gi 74864380   1059 LKCQDNLLSEQfng-------kiGSQFLVSCIENC--TKSKYFIKGTNn-YYTPDSSICKAAIHAGIYkp---------- 1118
gi 1008946655 1033 LRCEDTLLR-Pefs------gvtGHQILVSCPADC--AHSTGPLHGCK--IYSADSSICKAALHMGAI------------ 1089
gi 500017170    30 LPDPGTLNQMEnva------pgtTMFFNVTGKTTG------GSLWGTD--YYTTDSSLAMAAVHSGAI------------ 83
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*.
1JBI_A          58 -----SN-SGGPVRVYSLPGRENYSSVD-ANGIQS-QMLSRWsaSF 95
gi 122052556   811 ------S-SHGSFVVSIENGRKYYDGDK-QNGIQS-YFYNKTwhGL 847
gi 122051822   590 -----DN-KSG-LQVEIVSSPGELDGFF-QNGINS-ASVSTTlgES 626
gi 74989892    789 ------D-KHYLINLRVLNALGEYEGVY-QNGIIS-DSYINDsqEV 825
gi 123286428   194 -----AA-EGGTVTILILGEQPAFTGST-RNGVTT-ADYTAWprSY 231
gi 123286428    82 -----LD-VGGLVGFRQVAGLDRYEGTS-QNGVTT-LDYGSWnsSF 119
gi 74989283   1149 dednnKT-NNNSFIIKIVEGLTEYKSSRgHYGIVSkPEKQSQlrSF 1193
gi 74864380   1119 ---nmGN-KNNTFVIRIVEGLLEYKSSRgHFGILSkSEKQSQlrSF 1160
gi 1008946655 1090 -----QR-HGGEAVVTLHDGMPSYAASRgHYGVLS-IATNTPqvls 1128
gi 500017170    84 -----RNgQTGVVKVIFYPGRAQYAGST-RYGVTS-SSWGSYelSF 122
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