3GDB


Conserved Protein Domain Family
Glyco_hydro_85

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pfam03644: Glyco_hydro_85 
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Glycosyl hydrolase family 85
Family of endo-beta-N-acetylglucosaminidases. These enzymes work on a broad spectrum of substrates.
Statistics
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PSSM-Id: 335415
View PSSM: pfam03644
Aligned: 101 rows
Threshold Bit Score: 214.399
Threshold Setting Gi: 81611227
Created: 24-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3GDB_A        227 GGEefKAYAFDYWQYLDSMVFWEG----------------------------------LVPTPDVIDAGHRNGVPVYGTL 272  Streptococcus...
Q15ZN0         95 tqAtfNLYNFTHWSQIDVLNWFAGtad----------------------------hvvQIPARPWVDTAHRNGVKVIGSI 146  Pseudoalterom...
Q6A6T2        110 anDgfAHNVLNFWQYADYWSPWHGsatartpqslydpa------tsdwrtrnfefgvvDIPNPAYTNAAHRNGVKSIATI 183  Cutibacterium...
WP_031172444  140 GSLdpNYYAFTYWQYIDTLVFWGGsage---------------------------gliLAPNATVIDAAHRNGVKVYGTV 192  Streptosporan...
WP_014173428  121 YTNefSQYLFNYWQYSDVYASWHGmptegvpvnyydpn-------ldwkekwfefgavNLPNPGYTNAAHANGVRSLGCI 193  Streptomyces ...
AHI01421      112 HYDvfSANTDRFWQYLDVYSSWHGartagps---------------------hdwgvvNLPNPAWTDCAHRNGVLSLGCW 170  Kutzneria alb...
CDB30999      124 YYDdfSYNLFKFWQYTDYIGAGGRpttgfdavtak-------------eqeryeygviGIPIAAFINTAHKNGVKAIAEY 190  Firmicutes ba...
ADH93476      119 ANNdaNQHTLQFWQYADYWSPWHGsasvgtpralydpk------tskwqqrgfefgivDIPNPAWTNAAHRNGVKSIATI 192  Arcanobacteri...
CCY51492       94 GANnfTGYCPSYYQYKDKVVYWSGaade---------------------------giiCPPPAYSIDACHLNGVKILGQI 146  Bacteroides s...
CDC07870      119 YNNtfGYHTLNYWQYVDYFSPWHGaasqdspvslydweyenkeasrgwekryfefgvlNIPNPAYTNAAHKNGVMSIACL 198  Lachnospirace...
3GDB_A        273 FFNWSns---iaDQERFaeaLKqDADG-S-FPIARKLVDMAKYYGYDGYFINQETT-GDLV----------------KPl 330  Streptococcus...
Q15ZN0        147 FLAIAkyggspdTAESL---LKqDAQG-R-FIMAHRLVDIAQYYGFDGWLMNQETN---LTaikdaenelvegqkdiRRg 218  Pseudoalterom...
Q6A6T2        184 YFDPAfrp--glTFREA---FDkDPTS-RgYIIAEKLVEMAKYFGYDGYFLNEEEGnLQd-------------------- 237  Cutibacterium...
WP_031172444  193 FFPPTayggqiqWVRDF---VQkSGP--N-YPVADKLVQVAQHYGFDGWFINQETA-GGDA----------------AL- 248  Streptosporan...
WP_014173428  194 FFSPNdrg--dqTYSEL---LVrDTAG-N-FPAAAKLVEVAKYYGFDGYFFNQEDA-VAAA----------------DI- 248  Streptomyces ...
AHI01421      171 FWPRDnn-----eFDDL---VRrAGDG-S-YPVADKLIAMAGYFGFDGYFINQEAS-ISPA----------------QA- 222  Kutzneria alb...
CDB30999      191 FIPRDp-----qYTEEW---LYkDENG-E-FPYAKKMVEIARYYGFDGYFINQEGA-FDPS----------------LI- 242  Firmicutes ba...
ADH93476      193 YFDPAfrp--alTYREA---FEkDKDSkE-YRIAKQLVEMAKYYGYDGYFLNEEEG-NLGS----------------ES- 248  Arcanobacteri...
CCY51492      147 FLPPKafggkdiWPKQL---LTq-ENG-T-YPYAIKLFEIAKYFGFDGWFINNETY-GASS----------------DL- 202  Bacteroides s...
CDC07870      199 YFDQYyrp--gqTINEL---FVmDEDG-T-FPVAEKLIEMAEYFGYDGYFFNAEEA-VYPE----------------YS- 253  Lachnospirace...
3GDB_A        331 ---gE-KMRQFMLYSKEYAAKVNH-PIKYSWYDAM------TY-N------YGRYHQDGLGEYNYQFM-----Qpegdkv 387  Streptococcus...
Q15ZN0        219 aelgQ-KMLAFMQYLTAIAPQG----MEIHWYDSM------LE-N------GEVRWQNQLNEKNQAFL-----H------ 269  Pseudoalterom...
Q6A6T2        238 ----S-RFRPFMSCLTSKGL-------YTQWYTNT------PG-TwssskaGLLDHGRIMN------------------- 279  Cutibacterium...
WP_031172444  249 ----AtEIRSLMKYARAKGQA------EFMWYDAM------TE-N------GSVSWQDALTTANDAFL-----S------ 294  Streptosporan...
WP_014173428  249 ----P-TFKRFLKQLRD------G-GLYVQWYDSI------DNaT------GRVSYQNEFNSVNAPFV-----R------ 293  Streptomyces ...
AHI01421      223 ----T-ALMAMLTYLRHKA----P-TIYLQWYDAD------LP-D------GTLDYQNRFNAANAPWL-----K------ 268  Kutzneria alb...
CDB30999      243 ----P-LFKEMIQYLRSE-------GIYIQWYDSIatqadgTV-D------GVVRYRNMLDYRNRDWL-----M------ 292  Firmicutes ba...
ADH93476      249 ----E-ELRPLMQYLTRQ-------GLYTQWYSNI------GA-N----------W----DSHKEKWTglgddK------ 289  Arcanobacteri...
CCY51492      203 ----D--WCHFIRAFNEAADAEGYtWFECQFYDA------------------------GLN-VNSTVL-----A------ 240  Bacteroides s...
CDC07870      254 ----E-RKKKFLARLEEA-------GLYTQYYDTN------SY----------------MNESKAGWL-----E------ 288  Lachnospirace...
3GDB_A        388 P---------ADNFFANF-NWDKAKNDYTIATANWIG-RNPy-dVFAGLEL-QQg----------GSYK----------- 433  Streptococcus...
Q15ZN0        270 Qgv-----ssADAMFMNY-WWNKAMVERSVSLAqalgr--sgydLYFGADL-WPsrn------aqRAFS----------- 323  Pseudoalterom...
Q6A6T2        280 ------------SVFLNY-NWSGT-QDRSVEAAkaegy-dpyqsLFFGVEAn------------qAGFNgk--------- 323  Cutibacterium...
WP_031172444  295 Dpa-----rvSDSMFLDF-GWGAGNLRSSRDLARSLG-RDEh-eLYAGIDT-EA-----------NGYN----------- 343  Streptosporan...
WP_014173428  294 Dkae---gdvSDSVFLNY-WWDKSKLTRSKTYAESLGlNPRk-sVFAGVEag------------mYQFD----------- 345  Streptomyces ...
AHI01421      269 A---------CDSIFVNY-AWSRSGVTDSAAYARKIG-LDPyrsVFLPTDI-Edy--------gfGQPQ----------- 317  Kutzneria alb...
CDB30999      293 Ddtq---grvADSMWLNY-WWNWKMIDESVELAESLGlDPFe-sLFLGVEC-GYgrf-----egsAMYSssaypdigqcq 361  Firmicutes ba...
ADH93476      290 V---------MDSVFLNY-RWNSSSAKGIAEKAKEKGyDPHk-rVFFGVE---Anqa-----qltNKHT----------- 339  Arcanobacteri...
CCY51492      241 Sh-------kNTSQFLEYqTVTDKREKYAGMLGCSIE-ETFs-rVYAGAQM-VGaglqgaqeylnGAFP----------- 299  Bacteroides s...
CDC07870      289 SeidgvptkiQDSVFVNY-GW-PGSFDSQLEWMKENN-IDPyeqAFYGIEClQGkf--------nGGHG----------- 346  Lachnospirace...
3GDB_A        434 ---TKVKWNDI-------LDE-Ngk---lrLSLGLFAP------------D--TITSLG-------KT------------ 466  Streptococcus...
Q15ZN0        324 ---KTQWLEDL-------F---DsdteqglTSIALFAP------------N--FNFNFS-------GEphtpifsqfkdd 369  Pseudoalterom...
Q6A6T2        324 -hrSATELPSI---------YeSrrnhspkASVALFTP------------S----------------------------- 352  Cutibacterium...
WP_031172444  344 ---TGVSWDAV-------FPA-Gqp---hvTSLGIYRP------------E--WTWKSS-------SG------------ 376  Streptosporan...
WP_014173428  346 ---QPYNLDNN-------LGT-D-------G-----APmnaiatlgadfvS--SDYANK-------TDdk---------- 383  Streptomyces ...
AHI01421      318 ---PPTDPRWV-------FPE-Ggt---apASYGMFQH------------SqfWNHGNY-------GN------------ 352  Kutzneria alb...
CDB30999      362 seaTVKYLDWI-------LDD-Dgn---pqMSLALWGG------------D--FVHEAY-------GK------------ 397  Firmicutes ba...
ADH93476      340 ---TAKDIPGLyts-tdnHSP-T-------ASIALFTP------------S---DYYHR-------GL------------ 373  Arcanobacteri...
CCY51492      300 ---T--------------TGH-V-------GSIALFCP------------E--ERIWKD-------NV------------ 321  Bacteroides s...
CDC07870      347 ---TSSRIEELytnddgtKNL-K-------SSVALFTP------------S--DFYQRDlddgklqNT------------ 389  Lachnospirace...
3GDB_A        467 ---GE-----------------D------Y----------H------------------------------KNE------ 474  Streptococcus...
Q15ZN0        370 pqdSL-----------------R------F----------Y------------------------------QTE------ 380  Pseudoalterom...
Q6A6T2        353 ----------------------D------M----------YqrgladavkpkgadkdvplfqqdpyqwmvaERE------ 388  Cutibacterium...
WP_031172444  377 ---PA-----------------D------F----------R------------------------------TRD------ 384  Streptosporan...
WP_014173428  384 --aQS-----------------A------V----------F------------------------------DRE------ 392  Streptomyces ...
AHI01421      353 ---AV-----------------TpeqqqpY----------F------------------------------RTE------ 366  Kutzneria alb...
CDB30999      398 ---VD-----------------N------L----------Rytdgy--------------------qwiseERE------ 415  Firmicutes ba...
ADH93476      374 ---DD-----------------D------FknisdptnpvH------------------------------QRDgfqwmv 397  Arcanobacteri...
CCY51492      322 ---SKllgtsdncgekayaaqeQ------T----------F------------------------------RNE------ 346  Bacteroides s...
CDC07870      390 ---NY-----------------Q------W----------Mi----------------------------aERE------ 399  Lachnospirace...
3GDB_A        475 ---------------------------------DIF------------------------------Ftgyqgdptgqkpg 491  Streptococcus...
Q15ZN0        381 ---------------------------------QRL------------------------------Fvgddl-------- 389  Pseudoalterom...
Q6A6T2        389 ---------------------------------RMY------------------------------Fsgvtsnpkdtga- 404  Cutibacterium...
WP_031172444  385 ---------------------------------SRY------------------------------Wvganadpsntats 401  Streptosporan...
WP_014173428  393 ---------------------------------RRW------------------------------Wtgssqgsttpeg- 408  Streptomyces ...
AHI01421      367 ---------------------------------RHL------------------------------Wagpnenpsrtgrl 383  Kutzneria alb...
CDB30999      416 ---------------------------------RMWytspkesavdhsldnidrtdvevgvdrevvWkglsr-------- 454  Firmicutes ba...
ADH93476      398 darqrlyfsggaknpakaefgskakiddvtsssQME------------------------------Wggv---------- 437  Arcanobacteri...
CCY51492      347 ---------------------------------EIM------------------------------Wvnnigdpsnltnf 363  Bacteroides s...
CDC07870      400 ---------------------------------RMF------------------------------Fsgvksdptntgdq 416  Lachnospirace...
3GDB_A        492 d------------kdwygianlvadrTP----------------AVgNTFTTSFNTGHG 522  Streptococcus pneumoniae R6
Q15ZN0        390 ----------------------nlanNDlngwpgigryvpakttVNslpFETYFNTGQG 426  Pseudoalteromonas atlantica T6c
Q6A6T2        405 ---------------hpghsrpevgvADssswvgaadftparsvIGgrrFHTDFNTGHG 448  Cutibacterium acnes
WP_031172444  402 -------------sswkglahhiaesTA----------------VTaKPFVTGFNTGHG 431  Streptosporangium roseum
WP_014173428  409 --------------swkgiskyvaerSV----------------IKgGTFATSFNTGHG 437  Streptomyces bingchenggensis
AHI01421      384 htqkag--aftdfqawdgiahyvvekSV----------------IGsLPFTTRFNTGKG 424  Kutzneria albida DSM 43870
CDB30999      455 ---------------------yvaerSA----------------INgSVFNTDFNNGHG 476  Firmicutes bacterium CAG:137
ADH93476      438 -----------------------adfVPar------------svIRgNSFSTNFNIGRG 461  Arcanobacterium haemolyticum DSM 2...
CCY51492      364 -------------dtwrgfsgailerSN----------------IQsMPFESSMSVGLG 393  Bacteroides sp. CAG:189
CDC07870      417 kgygrpdvqvddagnwpgvadfsaerSV----------------IDgTTFYSNFNVGKG 459  Lachnospiraceae bacterium CAG:364
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