1JNY,1D2E,2YWE,6BK7,1ZN0,5H7J,6NOT,1N0V,5A9W,4D61,2H5E,5K0Y,3DEG,4CRN,3JCR,2D74,3JB9,1S0U,4ZU9


Conserved Protein Domain Family
GTP_EFTU_D2

?
pfam03144: GTP_EFTU_D2 
Click on image for an interactive view with Cn3D
Elongation factor Tu domain 2
Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA. This domain is also found in other proteins such as elongation factor G and translation initiation factor IF-2. This domain is structurally related to pfam03143, and in fact has weak sequence matches to this domain.
Statistics
?
Aligned: 213 rows
Threshold Bit Score: 32.964
Threshold Setting Gi: 549737
Created: 6-May-2019
Updated: 18-Jul-2019
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
1JNY_A 247 GTVPVGRVESGVLKVGDKIVFm-------pAGKv-------------GEVRSIETHHTKMDKAEPGDNIGFNVRGVE--- 303 Saccharolobus solfata...
O26361 230 GGVIGGSLVQGRLRVGDEIEIrp------gIQVkkdgkq--twmslhSTITGLVAGGEEMEEVGPGGLVGVGTLLDP--- 298 Methanothermobacter t...
Q58657 232 GGVLGGAIIQGVFKVGDEIEIrp------gIKVtegnkt--fwkpltTKIVSLAAGNTILRKAHPGGLIGVGTTLDP--- 300 Methanocaldococcus ja...
O96719 244 GGVIGGSLVTGMLRVGDKIEIrp------gLVIrkgnrf--vcrpfvSEIVSLKAESIDLSEAYPGGLIGVGTTMDP--- 312 Encephalitozoon cunic...
P32481 335 GGVAGGSILNGVFKLGDEIEIrp------gIVTkddkgki-qckpifSNIVSLFAEQNDLKFAVPGGLIGVGTKVDP--- 404 Saccharomyces cerevis...
Q54XD8 270 GGVAGGSILKGVLKIGDEIEVrp------gVISkeldgki-kcspifCRIISLFAEENELQYAVPGGLIGVGTKIDP--- 339 Dictyostelium discoideum
Q24208 275 GGVAGGSILSGVLKVGQEIEVrp------gVVTkdsdgni-tcrpifSRIVSLFAEQNELQYAVPGGLIGVGTKIDP--- 344 fruit fly
O64490 269 GGVAGGSILRGVLRVNQLIEIrp------gIVTkdergns-kctpiySRIISLYAEQNELQFAVPGGLIGVGTTMDP--- 338 thale cress
5K0Y_S 238 GGVAGGSILKGVLKVGQEIEVr-------pGIVskdsegklmckpifSKIVSLFAEHNDLQYAAPGGLIGVGTKIDPtlc 310 rabbit
1S0U_A 229 GGVLGGAIIQGVFKVGDEIEIrpgikvtegNKTfwk--------pltTKIVSLAAGNTILRKAHPGGLIGVGTTLDP--- 297 Methanocaldococcus ja...
1JNY_A 304 K---KD---IKRGDVVG 314 Saccharolobus solfataricus
O26361 299 A---LTkadSLSGSVAG 312 Methanothermobacter thermautotrophicus str. Delta H
Q58657 301 Y---LTksdALTGSVVG 314 Methanocaldococcus jannaschii DSM 2661
O96719 313 S---FCkadKLVGQVMG 326 Encephalitozoon cuniculi GB-M1
P32481 405 T---LCradRLVGQVVG 418 Saccharomyces cerevisiae S288C
Q54XD8 340 T---LCradRLVGQVLG 353 Dictyostelium discoideum
Q24208 345 T---LCradRLVGQVLG 358 fruit fly
O64490 339 T---LTradRLVGQVLG 352 thale cress
5K0Y_S 311 R---AD---RMVGQVLG 321 rabbit
1S0U_A 298 YltkSD---ALTGSVVG 311 Methanocaldococcus jannaschii
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap