1JNY,5TV2,1D2E,2YWE,1ZN0,2XEX,1N0V,5A9W,4D61,2H5E,5K0Y,3DEG,4CRN,3JCR,2D74,3JB9,1S0U,4ZU9,5ME0,5FG3


Conserved Protein Domain Family
GTP_EFTU_D2

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pfam03144: GTP_EFTU_D2 
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Elongation factor Tu domain 2
Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA. This domain is also found in other proteins such as elongation factor G and translation initiation factor IF-2. This domain is structurally related to pfam03143, and in fact has weak sequence matches to this domain.
Statistics
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PSSM-Id: 335238
View PSSM: pfam03144
Aligned: 215 rows
Threshold Bit Score: 33.3354
Threshold Setting Gi: 3122251
Created: 22-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1JNY_A 247 GTVPVGRVESGVLKVGDKIVFmpAGKv--GEVRSIETHHTKMDKAEPGDNIGFNVRGVEKKDiKRGDVVG 314 Sulfolobus solfataricus
P23112 308 GLVATGRVFSGTLRAGEEVWLvnAkr--qQRILQVSLYMGAIRELAEEIPVGNIAAALGMDAaRSGETGV 375 Sulfolobus acidocaldarius DSM 639
B8D6B2 307 GLVATGRIYSGTLRPGEEVWLvnArv--pQRVLQVSLYMGPYRELADEITAGNIAAALGLEKaRSGETVv 374 Desulfurococcus kamchatkensis 1...
O28385 304 GEIAVGRLYSGTIRPGMELYI--VDRkakNRIQTVGLYMGPRRVEVDEIPAGNIVAVIGLKDaVAGSTCT 371 Archaeoglobus fulgidus DSM 4304
Q9HM85 307 GEIAAGRVFSGTLEKGQELYV--SGTagkNRVQSVGIYMGGEREEVDEVPAGNIAAVTGLKDaIAGSTVS 374 Halobacterium salinarum NRC-1
O93632 306 GEVSTGRLFSGSLSRGMEVYV--SGAsktNRIQQVGVFMGPERLEVDAIPAGNIAAVTGLRDaFVGATVT 373 Methanococcoides burtonii DSM 6242
O27131 306 GEVATGRVYGGAIEKGSEVFL--VGShskARVQQVGVYMGPERVNTDKVPAGNIVAITGAKNaVAGETIC 373 Methanothermobacter thermautotr...
Q5JFZ3 306 GEVATGRVWSGTVKTGQEVYL--INSkrkARIQQVGIYMGPERINMEAVPAGNIVAVTGLRDaMAGETVs 373 Thermococcus kodakarensis KOD1
Q58448 306 GAVSVCRLFSGRIKQGDEVYM--VNNqqkAKIQQVSVFMGPERIPVDSISAGNICALVGLKEaSAGETIC 373 Methanocaldococcus jannaschii D...
Q6LXI2 306 GAISACRLFSGRIKQGDDLYL--VGSkqkARAQQVSIFMGAERVQVPSISAGNICALTGLREaTAGETVC 373 Methanococcus maripaludis S2
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