2V3C,2JQE


Conserved Protein Domain Family
SRP_SPB

?
pfam02978: SRP_SPB 
Click on image for an interactive view with Cn3D
Signal peptide binding domain
Statistics
?
PSSM-Id: 335176
View PSSM: pfam02978
Aligned: 922 rows
Threshold Bit Score: 65.49
Threshold Setting Gi: 123492715
Created: 20-Mar-2017
Updated: 23-May-2017
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
2V3C_C       324 KFTLNELMTQLEAIENMGSMKKILSMIPG-F--GgaMPKElshlT--EA-KIKKYKVIISSMTKEE-RENPK-II-KA-- 392 Methanocaldococ...
Q1D2W0       336 QFTMKDFVEQIRMVRKMGPLKDLLEKFPlfgdl-------tehlNpdEK-ELTKIESMYDSMTAKE-RLRPDtVN-N--- 402 Myxococcus xant...
XP_002649856 335 RFTLGDFRHFYNQICTLGPITNLLKITPGmNkfv-----------ipdEtKLKKIGSIFNSMCKAE-LNSIGdIFn-Kep 401 Enterocytozoon ...
XP_007605157 257 KFRLIDFKNIYTQIVSLGPISKMLEMIPGlGnmA--IPDE--------S-KFKRIMHMFDSMTRKE-LESNGdVFl-Kep 323 Vittaforma corn...
XP_002949270 331 nvTMSVLKDMFESVLELGPMSQMMSMLPGfNsdllpKGND----KqsQM-MIRRYITIIESMTDKE-MNTTN-IKiLqep 403 Volvox carteri ...
EHY66858     326 EFSIGDFYDQYKRILELGPIGQLLSLIPGlNssm-----------fneK-EFKKMGTIFTAMTKKElKTNGEvFI--Rsl 391 Nematocida sp. ...
XP_002964268 325 niSFKFLCDQIENITSMGSLSQLMSMIPGfNn----INVQ----SfdIQ-QFRKYRVILDSMTNEE-RNSSSlSE----- 389 Selaginella moe...
WP_012241149 334 DFTLEDFLDQVRMIQKMGSLKDLVDKLPlggmfpg---glpqdvNldDR-ELVRIEAIIQSMTRLE-KSDPYaLV--Rep 406 Sorangium cellu...
WP_012098171 335 DFTLEDFVNQIRLVRKMGPLGELMEKFPlfgdl-------pegfQfdDQ-ALTKIVAMVDSMTKAE-RLRPDvIT-E--- 401 Anaeromyxobacte...
WP_014810740 334 EFGFGDFLEQIRAIKKMGPLQDLIEKLPffpgg------lpssaKvdDY-ELVRIESIINSMTPAE-RKHPDiINq---- 401 Desulfomonile t...
2V3C_C       393 SRIRRIARGSGTTENDVREVLRYYETTK 420 Methanocaldococcus jannaschii
Q1D2W0       403 SRINRIAKGSGRKVEEVKELLQKFGMMQ 430 Myxococcus xanthus DK 1622
XP_002649856 402 NRMIRIARGSGTSKEQVSELLHNFKSMS 429 Enterocytozoon bieneusi H348
XP_007605157 324 SRIDRVARGSGTHRDLVSEMLGNFRQMS 351 Vittaforma corneae ATCC 50505
XP_002949270 404 SRVNRLARGSGSTPQQVLALLESYKHYS 431 Volvox carteri f. nagariensis
EHY66858     392 SRLVRVAKGSGVTPTQVRDAINTYRMMA 419 Nematocida sp. 1 ERTm2
XP_002964268 390 SRILRLAKGSGTSVDNVQQMVNHVKTMS 417 Selaginella moellendorffii
WP_012241149 407 KRVERIAKGSGSKPEAVSELVQKFLFMR 434 Sorangium cellulosum
WP_012098171 402 GRVKRIARGSGRGEKEVRDLLKQYNAMR 429 Anaeromyxobacter sp. Fw109-5
WP_014810740 402 SRIARVARGSGREEREVKDLLTKFRDMR 429 Desulfomonile tiedjei
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap