4AK9,1WGW,1J8M,4C7O,3DM5,2V3C


Conserved Protein Domain Family
SRP54_N

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pfam02881: SRP54_N 
Click on image for an interactive view with Cn3D
SRP54-type protein, helical bundle domain
Statistics
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PSSM-Id: 335137
View PSSM: pfam02881
Aligned: 1498 rows
Threshold Bit Score: 28.5923
Threshold Setting Gi: 503697504
Created: 20-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4AK9_A        32 VVDELLTYW-----NL-DESESILDE----LEEVLLVSDFGPKTALKIVDTIrK-DILaGR----LK---SGPQIKEALK 93  Physcomitrella ...
Q7VQG1         5 LSKKMSQSIrnimySK-RVTKYDVSKyldiVQRSLLESDVALSVVQSFVELVkDnIIK-INidscCI---SGPEFIKILR 79  Candidatus Bloc...
Q2GGZ2         5 LTSSLTNVIqkmqsKH-VISSEDFDAameeVKVALLEADVSLAVVKDFISNVkEkIVG-GTtvkgVL---PTQMIIKKIQ 79  Ehrlichia chaff...
Q2GKZ5         5 LTKGFSSALqrlsgKR-EISSKDFDLviedITQALLDADVNLGVVDEFIENVkSkIVG-GDvvkgVL---PEQMVIKRIE 79  Anaplasma phago...
Q2GDM3         5 LSKKIGGALdgiknRGvI-TEKEFDDfvrkLRLTFLEADVSLPVTKQFIANVrEsVIGkSR----VKgisTPAVIGSVVK 79  Neorickettsia s...
WP_010265072   5 LAKGIASAVqklggRR-EISDKDFDLvledVTQALLDADVNLMVVEQFIGDVkSkIVG-GEvvkgVL---PEQMIIKLME 79  Anaplasma margi...
WP_013877976   5 LTKKLNIFLki-lhIK-VFNKKNIKNtlykVRCALIKSDVALTVIDSFLRLNkKkSLG-SAinkdLT---PGQTLIKIIF 78  Buchnera aphidi...
XP_009035431 269 grsALGSLVanvsgTQ-TLTRELVDPamekLRTTLMEKNVAVEVADAITATVsEsLVG-KK----VE---RFARAKTLVR 339 Aureococcus ano...
CBY08451     273 tsSSMLSMFktlvsQK-ELTEASIDPilqkYKDNLISKNVASEIATKLISAVkNkLVG-QT----IG---TFSSIKKAVF 343 Oikopleura dioica
CBJ30645     281 LKTSLGGFLhgltgTK-VLEERDLEPvmtkMREQLMGRNVASEVANDITASVqAtLID-QK----LK---SFTRVKTAVQ 351 Ectocarpus sili...
4AK9_A        94 KN 95  Physcomitrella patens
Q7VQG1        80 HA 81  Candidatus Blochmannia floridanus
Q2GGZ2        80 DC 81  Ehrlichia chaffeensis str. Arkansas
Q2GKZ5        80 EC 81  Anaplasma phagocytophilum str. HZ
Q2GDM3        80 EE 81  Neorickettsia sennetsu str. Miyayama
WP_010265072  80 EC 81  Anaplasma marginale
WP_013877976  79 NE 80  Buchnera aphidicola
XP_009035431 340 DA 341 Aureococcus anophagefferens
CBY08451     344 Ng 345 Oikopleura dioica
CBJ30645     352 SA 353 Ectocarpus siliculosus
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