1TAQ,6C36


Conserved Protein Domain Family
5_3_exonuc_N

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pfam02739: 5_3_exonuc_N 
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5'-3' exonuclease, N-terminal resolvase-like domain
Statistics
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Aligned: 886 rows
Threshold Bit Score: 97.4483
Threshold Setting Gi: 122100660
Created: 27-May-2019
Updated: 18-Jul-2019
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1TAQ_A          13 RVLLVDGHHLAYRTFHAlkg-------ltTS------RgePVQAVYGFAKSLLKALKEDGd-A-VIVVFD-AkaP-SFRH 75   Thermus aqua...
Q6KHF6           5 KILLIDGNLLAFKSFFAtayig---sslqTS------TgiPTNAVHTFINTIFKLLKELNptH-IFVAFD-Kp-GkTFRH 72   Mycoplasma m...
Q98PK2          10 KFLLIDGNYLVHRSYYVsfkfk---nnfrST-------------IYLFFQTIIKIIKNLNpeN-IFIAFD-Ee-GgTWRH 70   Mycoplasma p...
CCP24216         5 KTLVIDGNYMLFQSFYAtykgdi-nailrTT------NgiPTNAISVFLSQLIKLLKFIRptH-LLIAFD-Fg-TkTKRH 74   Mycoplasma c...
Q4A5N5           4 KALIIDGNYLMFQSFYAtyrgdi-nvilrTS------NgtPTNAITLFLKQLVKYLVFYKpdY-LFIAFD-Ak-ErTKRH 73   Mycoplasma s...
jcvi:MCRO_0555   5 nFLIIDGNLLMFQSFYAtynpyn-syvmtSN------KgvTTNGTFQFFTTLINLLEELKpkY-LFIAFD-Ak-GkTKRH 74   Mycoplasma c...
CAL58863         7 LMLLVDGNFLIFQSFYAsynkynpnsvlvAK------DgtTTNGVHVFFQTLFKLIKFYNptH-LFIAFD-Ak-GkTKRH 77   Mycoplasma a...
Q4A9A5           4 KILLIDGTWLTFKSFFGgfhg----nrliNS------KgeMTFAVHIFFSSVFKLLKLLRpdN-VYFAFD-Fg-AkTPRH 70   Mycoplasma h...
CAX37548         7 QLLIIDGTFLAYRSYYAtsyna--tqiltTS------EgfETNAIVAFFKTLFLLLKKLNpkY-IYIAFD-Sh-VkTFRH 75   Mycoplasma h...
CDE44760         4 KVVIIDGQSFFKEIFYQ------------IPdfkrimNk-VDNAVCEFMQSMLCIIEKEEp-ShLFVVFSeE------KT 63   Clostridium ...
1TAQ_A          76 EAYGGYKAGRAPTPEDFPRQLALIKELVDLLGLARLEVPGYEADDVLASL-AKKa--eK-EgyeVRILTADKDLYQLLs- 150  Thermus aqua...
Q6KHF6          73 EFFEEYKSKRQSTPDSLKVQFIYIKRVLSKMRICWFEESLIEADDLIATW-VSKin--tsKd-eVIVYSSDKDLLQLVak 148  Mycoplasma m...
Q98PK2          71 DLCKEYKSQRSKMEDEFWNIFKAIREILDSINLNSGGFRGHEADDVIATI-TSKfk---dEn-qIYIFSRDKDLLQLIdk 145  Mycoplasma p...
CCP24216        75 QIFPEYKLGRVKAPQEVFQQMDLIKQLLSKLNIQIFQQEGDEADDIIGTY-CDKl----pGe--KFIFSSDRDLLQLVnk 147  Mycoplasma c...
Q4A5N5          74 ELLDRYKANRIKAPQELFIQFDLIKEILKEMKVFYYESAGDEADDLIATF-CKNf----eSl-eKFIFSRDKDLLQLVnk 147  Mycoplasma s...
jcvi:MCRO_0555  75 EEYPDYKAGRTKAPEIIYEQFESVKKLLTLLKINHNEIVGAEADDLIATV-SKIn-----Ev-sKYIYSKDQDLLQLVke 147  Mycoplasma c...
CAL58863        78 EEYDDYKAGREKAPEIIFEQFDLAKKILSAMNIKWFEKVGYEADDLIATI-AKHn----sQf-nNYIYSKDKDLLQLVnq 151  Mycoplasma a...
Q4A9A5          71 QMYPDYKKGRIKPPDSLFFQMDQIKKILSLANFLWSEHQDFEADDLIASL-KKKiqkkDnEa-eILIFSADQDLLQLVdk 148  Mycoplasma h...
CAX37548        76 ELFPSYKDGRKKAPESFYLQLDLIQEILTNINIQNQYYNGFEADDIIAKV-KNKf-----Nl-nTIIFSGDQDLNQLIde 148  Mycoplasma h...
CDE44760        64 ESENT-----GDLPISYTRQMKQIKDLLEKLEISVVQEKDAETCDIVSTIlAQNtkqwEkV----LIYSNNVKMLQMVse 134  Clostridium ...
1TAQ_A         151 ------dR------IHVLHpeg----------ylITPAWLWEKYG 173  Thermus aquaticus
Q6KHF6         149 -------------nVSVIskwdk------neyviDNENNFFErhs 174  Mycoplasma mobile
Q98PK2         146 -------------nVYIThdnelk-----nlisiENfyqnfqlep 172  Mycoplasma pulmonis UAB CTIP
CCP24216       148 -------------dTNYIikkas-------dislITNDNFYNIFQ 172  Mycoplasma cynos C142
Q4A5N5         148 -------------nTRVFfkd-----------eeVTYLNFFEKYQ 168  Mycoplasma synoviae 53
jcvi:MCRO_0555 148 -------------dISIIyknpet-----kkfatVNKDNFYDIYN 174  Mycoplasma crocodyli MP145
CAL58863       152 -------------nNSIIKvvkkvgnfteykletVNE--FADIYG 181  Mycoplasma agalactiae PG2
Q4A9A5         149 -------------kTKVItkikn------nfiniNTQENFYESYG 174  Mycoplasma hyopneumoniae J
CAX37548       149 -------------qTAIIkkdktg-----sffflNSK-NFSEYYD 174  Mycoplasma hominis ATCC 23114
CDE44760       135 ntevifsSilreedFKIYS-----------------EEKVIEEYG 162  Clostridium sp. CAG:411
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