Conserved Protein Domain Family
FliD_N

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pfam02465: FliD_N 
Flagellar hook-associated protein 2 N-terminus
The flagellar hook-associated protein 2 (HAP2 or FliD) forms the distal end of the flagella, and plays a role in mucin specific adhesion of the bacteria. This alignment covers the N-terminal region of this family of proteins.
Statistics
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PSSM-Id: 334939
View PSSM: pfam02465
Aligned: 477 rows
Threshold Bit Score: 34.0695
Threshold Setting Gi: 515115608
Created: 21-Mar-2017
Updated: 23-May-2017
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123276780  14 SGIDTNNLVKQLTSIEKAaPQNRIDKTRDLTESKISDFGKLKSALSTLKDAT----K--TLTDpEGLF-S-KTASFTESD 85
gi 503013899  10 nGVDFGQVVSELAKVQRL-PIDALTAKKKDLQTKLTDYGALGNKLLALQSAA----N--ALRL-PSSF-NrSTSTVSDDT 80
gi 512724578   8 TGIDTNQIIQEMATIARq-PETIYQQDMQQIQARQAAYNALSAQLLTLQTAAlnldT----Y---STFrA-MTVSSSNQN 78
gi 490175632  13 SGLDLQDIIDQLKGVDEA-VITAKEAEQTELQTQVDAYNTVNAKLFSIKSDA----L--NLSL-ASNFlG-NRVSISDED 83
gi 504771788  53 SGLDLQDILDQLKGVDET-RITAKKNKKTQFQNQVDAYNTINAKLFSIKSDA----L--NLSL-ASNFlD-NSISVTDED 123
gi 506385774  13 SGLDLQGILDDLRAVDQT-TITNQETEQTGIKEKVQEFNQLNSTLLSMKSTA----L--DLSL-GSNFlN-REITASG-N 82
gi 503673005  16 SGLDLQGLLDNLRTIEEK-PIKALEAKKDFYEKRLTEFDWLNTKVLSLKSKS----L--DFSL-ESTYlT-RQVSVSG-S 85
gi 502772327  11 SGLDTNSIVDTLVKQARI-PIDNLQAKYDLKTLEKNVYQDISTDLVNLKTDL----L--SLKL-QATFkN-MTASSSNTS 81
gi 502775768  11 SGMDTNALVEQLMQQAQV-PVDKLYGELSYKGLEEEVYENVDNMLGNLTSDL----L--TLRL-ESTFkT-KTTTSTNEG 81
gi 503270699  10 SGLPMGELMDKMLEVRGQ-TMNRLLDNRELVQIKKNAFMDVNNDMMTLRNQL----LdmNL---RSTYyN-REVSSSNEA 80
                         90       100       110
                 ....*....|....*....|....*....|
gi 123276780  86 ALVPVE--LGtDVQTGS-YTFEVNAIAKSQ 112
gi 503013899  81 ILTAQA--GA-GAATGS-YTVQVTQLAKAn 106
gi 512724578  79 VVTATA--QP-GAQAGT-HTITVNALAQAE 104
gi 490175632  84 ILSATV--GD-GYEASS-YSLEVTQKAQKN 109
gi 504771788 124 VISATV--GD-GYDESS-YSVDVTQKAKRn 149
gi 506385774  83 AVTATS--VS-GAKTMS-HSMEVTALASHS 108
gi 503673005  86 AITAEA--DV-GALEGN-YTVEVNQLARKs 111
gi 502772327  82 ILSATA--TS-EASVGT-HTIKINSIAQNS 107
gi 502775768  82 VATATA--TT-DAAVGT-HTLQVDQLANNS 107
gi 503270699  81 LVSGTAewNA--AK--TsHTVEVIQAAKGA 106
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