3M4O,5FJ8,4C2M


Conserved Protein Domain Family
RNA_POL_M_15KD

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pfam02150: RNA_POL_M_15KD 
Click on image for an interactive view with Cn3D
RNA polymerases M/15 Kd subunit
Statistics
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PSSM-Id: 280336
View PSSM: pfam02150
Aligned: 9 rows
Threshold Bit Score: 42.0735
Threshold Setting Gi: 3024570
Created: 14-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3M4O_I   4 FRFCRDCNNMLYPREDKENnrllfeCRTCSYVEEAGSP 41  baker's yeast
Q58548   2 VKFCPKCNNLMLPKDGKLK------CAVCGYEEETTAE 33  Methanocaldococcus jannaschii DSM 2661
P36958  18 IRFCQECNNMLYPKEDKENkillyaCRNCDYKQEADSN 55  fruit fly
5FJ8_I   2 LSFCPSCNNMLLITSGDSGvyt-laCRSCPYEFPIEGI 38  baker's yeast
O94703   7 LIFCSECGNLLESTTAQWTt-----CDQCQSVYPSEQF 39  Schizosaccharomyces pombe 972h-
4C2M_I   7 LIFCLDCGDLLENPNAVLGsn--veCSQCKAIYPKSQF 42  baker's yeast
O13896   1 MQFCPTCGNHLIVAVDEEGrna-fdCRTCPYHFPISTF 37  Schizosaccharomyces pombe 972h-
O29033   1 MEFCPKCKSLMIYQGDKLV------CRKCGYEKEADDS 32  Archaeoglobus fulgidus DSM 4304
Q5JF34   1 MKFCPKCGNLMLPDRKRKVw----vCRSCGYEEPFDEE 34  Thermococcus kodakarensis KOD1
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