2GJ9,3J8G,3J8G,4KYU,4DCS,5DN8,1XZP,1UDX,1MKY,1MKY,4CSU,1X18,5ADY,3GEE,5FH9,4A9A,3LX5,3IBY,3QQ5,1SUL,1PUI,5UCV,2QTF


Conserved Protein Domain Family
MMR_HSR1

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pfam01926: MMR_HSR1 
Click on image for an interactive view with Cn3D
50S ribosome-binding GTPase
The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides, with a preference for guanine nucleotide.
Statistics
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PSSM-Id: 334744
View PSSM: pfam01926
Aligned: 699 rows
Threshold Bit Score: 44.1342
Threshold Setting Gi: 81623090
Created: 17-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2GJ9_A        6 KVVIAGRPNAGKSSLLNALAG--ReAA-IVTDIAGTTRDVLRE----HIHidgMPL---HIIDTAGLr--Easd---evE 70
gi 31076686  51 EVAFVGYSNSGKSSIINALTNqkK-LA-KISRTPGRTRLINIF----SVTs---EI---RLVDFPGYgyaQvsrs-iskK 117
gi 31340065  23 EIAFFGRSNSGKSKAINALFDkkK-IS-ISSKKPGRTNFINVF----IMNk---KL---RIIDLPGFgysKiskkkskiK 90
gi 24418370  27 EVAFAGRSNAGKSSALNALTRqnS-LA-RVSKTPGRTQQLVFF----QIQp---ER---YLVDLPGYgyaKvpqd-lqaH 93
gi 81578317  26 EVCFVGRSNAGKSSAINVLCNqrR-LA-FSSKTPGRTRLINMFglpdPLAp---GEqlgFLVDLPGYgyaSvahr-ekeK 99
gi 25452939  15 EIIFAGRSNVGKSSLLKELFG--A-KV-RVGKRPGVTLRPTHA----QVSd----L---LITDMPGFg--Fmsg--vkeR 75
gi 25452940   3 EIVLVGRSNVGKSSLIRAITRgaA-DV-RVGKRPGVTRKPVFH----ELDg---EL---VLVDMPGF---Gfm------- 60
gi 13124170   5 EVIFAGRSNVGKSTLFSALFk--F-EV-RKGKKPGTTIRPNSF----QVG----SV---IFTDLPGF---G--------Y 58
gi 2501554   26 KVIVVGRSNVGKSTFVRLMTG--R-KDiRVGKKPGVTLKINEY----DM----GEY---ILVDMPGF---G--------Y 80
gi 13124176  29 TIIFAGRSNVGKSTLIYRLTG--K-KV-RRGKRPGVTRKIIEI----EWKn----H---KIIDMPGF---G--------F 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2GJ9_A       71 RiGIERAWQE----IE------QA--DR-VLFMVD----------------------------GTttdavdpaeIWPEFI 109
gi 31076686 118 WkEMIFQYLN----IQ------KCl-QG-LVIITD----------------------------IR-----------CPI- 145
gi 31340065  91 Y--LLDDYFK----SR------K---SLkILIIL-----------------------------ED----------IRRSV 116
gi 24418370  94 WqAFIDRYFR----TRe------Al-RG-LVVVMDirh-----------------------plKD-------------YD 125
gi 81578317 100 WaDILGGYL-----RD------RAslAG-IVLLIDi---------------------------RR---------GVTDLD 131
gi 25452939  76 KqDIVKDKTV----HYiednagRI--KI-AVLVIDgpafpei---------------vdrwdsRD----------QIPID 123
gi 25452940  61 -sGVPRRYQErvkdLIvryleeK---DN-ILFAIHvvdakalpe-----------iaerwerrGE-----------IPID 113
gi 13124170  59 VsGYSRNFSE----RV------K---DF-VVEYIEtnarrivasvevidassfleiaerwekrGY-----------IPVE 113
gi 2501554   81 MaGLPKKVQE----KI------K---DE-IVHYIEehadeiaaavqiidtksffeiverwkgrGE-----------IPID 135
gi 13124176  83 MmGLPKEVQE----RI------K---DE-IVHFIEdnaknidvavlvvdgkaapeiikrwekrGE-----------IPID 137
                       170       180       190
                ....*....|....*....|....*....|....
2GJ9_A      110 ARLPAK---------L------P---ITV-VRNK 124
gi 31076686 146 KEIDELvinlavslnI------P---ILL-LLNK 169
gi 31340065 117 SEFNEKliylsfnlkI------P---VLI-LLSK 140
gi 24418370 126 LQMLGY---------Aa----eRglpAHG-LLTK 145
gi 81578317 132 RRLTNF---------Iapt-grP----VLaLLTK 151
gi 25452939 124 VEMFDF---------Lrei-giD---TIV-AANK 143
gi 25452940 114 REMFQF---------LnevgldP----IV-AANK 133
gi 13124170 114 IEMFEF---------Lndv-tpR---VFL-AANK 133
gi 2501554  136 LEMFDF---------Itdl-kiS---PIL-VANK 155
gi 13124176 138 VEFYQF---------Lrel-diP---TIV-AVNK 157
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