2GJ9,3J8G,3J8G,4KYU,4DCS,5DN8,1XZP,1UDX,1MKY,1MKY,4CSU,1X18,5ADY,3GEE,5FH9,4A9A,3LX5,3IBY,3QQ5,1SUL,1PUI,5UCV,2QTF


Conserved Protein Domain Family
MMR_HSR1

?
pfam01926: MMR_HSR1 
Click on image for an interactive view with Cn3D
50S ribosome-binding GTPase
The full-length GTPase protein is required for the complete activity of the protein of interacting with the 50S ribosome and binding of both adenine and guanine nucleotides, with a preference for guanine nucleotide.
Statistics
?
PSSM-Id: 334744
View PSSM: pfam01926
Aligned: 699 rows
Threshold Bit Score: 44.1342
Threshold Setting Gi: 81623090
Created: 17-Mar-2017
Updated: 23-May-2017
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
2GJ9_A   6 KVVIAGRPNAGKSSLLNALAG--ReAA-IVTDIAGTTRDVLRE----HIHidgMPL---HIIDTAGLr--Easd---evE 70  Escherichia coli BL21...
Q89AD0  51 EVAFVGYSNSGKSSIINALTNqkK-LA-KISRTPGRTRLINIF----SVTs---EI---RLVDFPGYgyaQvsrs-iskK 117 Buchnera aphidicola s...
Q8D338  23 EIAFFGRSNSGKSKAINALFDkkK-IS-ISSKKPGRTNFINVF----IMNk---KL---RIIDLPGFgysKiskkkskiK 90  Wigglesworthia glossi...
Q8P5E4  27 EVAFAGRSNAGKSSALNALTRqnS-LA-RVSKTPGRTQQLVFF----QIQp---ER---YLVDLPGYgyaKvpqd-lqaH 93  Xanthomonas campestri...
Q7VTA1  26 EVCFVGRSNAGKSSAINVLCNqrR-LA-FSSKTPGRTRLINMFglpdPLAp---GEqlgFLVDLPGYgyaSvahr-ekeK 99  Bordetella pertussis ...
Q8PTK0  15 EIIFAGRSNVGKSSLLKELFG--A-KV-RVGKRPGVTLRPTHA----QVSd----L---LITDMPGFg--Fmsg--vkeR 75  Methanosarcina mazei Go1
Q8TYT5   3 EIVLVGRSNVGKSSLIRAITRgaA-DV-RVGKRPGVTRKPVFH----ELDg---EL---VLVDMPGF---Gfm------- 60  Methanopyrus kandleri...
O28943   5 EVIFAGRSNVGKSTLFSALFk--F-EV-RKGKKPGTTIRPNSF----QVG----SV---IFTDLPGF---G--------Y 58  Archaeoglobus fulgidu...
Q57768  26 KVIVVGRSNVGKSTFVRLMTG--R-KDiRVGKKPGVTLKINEY----DM----GEY---ILVDMPGF---G--------Y 80  Methanocaldococcus ja...
O57939  29 TIIFAGRSNVGKSTLIYRLTG--K-KV-RRGKRPGVTRKIIEI----EWKn----H---KIIDMPGF---G--------F 82  Pyrococcus horikoshii...
2GJ9_A  71 RiGIERAWQE----IE------QA--DR-VLFMVD----------------------------GTttdavdpaeIWPEFI 109 Escherichia coli BL21...
Q89AD0 118 WkEMIFQYLN----IQ------KCl-QG-LVIITD----------------------------IR-----------CPI- 145 Buchnera aphidicola s...
Q8D338  91 Y--LLDDYFK----SR------K---SLkILIIL-----------------------------ED----------IRRSV 116 Wigglesworthia glossi...
Q8P5E4  94 WqAFIDRYFR----TRe------Al-RG-LVVVMDirh-----------------------plKD-------------YD 125 Xanthomonas campestri...
Q7VTA1 100 WaDILGGYL-----RD------RAslAG-IVLLIDi---------------------------RR---------GVTDLD 131 Bordetella pertussis ...
Q8PTK0  76 KqDIVKDKTV----HYiednagRI--KI-AVLVIDgpafpei---------------vdrwdsRD----------QIPID 123 Methanosarcina mazei Go1
Q8TYT5  61 -sGVPRRYQErvkdLIvryleeK---DN-ILFAIHvvdakalpe-----------iaerwerrGE-----------IPID 113 Methanopyrus kandleri...
O28943  59 VsGYSRNFSE----RV------K---DF-VVEYIEtnarrivasvevidassfleiaerwekrGY-----------IPVE 113 Archaeoglobus fulgidu...
Q57768  81 MaGLPKKVQE----KI------K---DE-IVHYIEehadeiaaavqiidtksffeiverwkgrGE-----------IPID 135 Methanocaldococcus ja...
O57939  83 MmGLPKEVQE----RI------K---DE-IVHFIEdnaknidvavlvvdgkaapeiikrwekrGE-----------IPID 137 Pyrococcus horikoshii...
2GJ9_A 110 ARLPAK---------L------P---ITV-VRNK 124 Escherichia coli BL21(DE3)
Q89AD0 146 KEIDELvinlavslnI------P---ILL-LLNK 169 Buchnera aphidicola str. Bp (Baizongia pistaciae)
Q8D338 117 SEFNEKliylsfnlkI------P---VLI-LLSK 140 Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis
Q8P5E4 126 LQMLGY---------Aa----eRglpAHG-LLTK 145 Xanthomonas campestris pv. campestris str. ATCC 33913
Q7VTA1 132 RRLTNF---------Iapt-grP----VLaLLTK 151 Bordetella pertussis Tohama I
Q8PTK0 124 VEMFDF---------Lrei-giD---TIV-AANK 143 Methanosarcina mazei Go1
Q8TYT5 114 REMFQF---------LnevgldP----IV-AANK 133 Methanopyrus kandleri AV19
O28943 114 IEMFEF---------Lndv-tpR---VFL-AANK 133 Archaeoglobus fulgidus DSM 4304
Q57768 136 LEMFDF---------Itdl-kiS---PIL-VANK 155 Methanocaldococcus jannaschii DSM 2661
O57939 138 VEFYQF---------Lrel-diP---TIV-AVNK 157 Pyrococcus horikoshii OT3
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap