4GFQ


Conserved Protein Domain Family
RRF

?
pfam01765: RRF 
Click on image for an interactive view with Cn3D
Ribosome recycling factor
The ribosome recycling factor (RRF / ribosome release factor) dissociates the ribosome from the mRNA after termination of translation, and is essential bacterial growth. Thus ribosomes are "recycled" and ready for another round of protein synthesis.
Statistics
?
Aligned: 960 rows
Threshold Bit Score: 66.3015
Threshold Setting Gi: 74843072
Created: 3-Jun-2019
Updated: 18-Jul-2019
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
4GFQ_A        48 LATVRAGRASA-SVLDK--VQVd-YYGAP-TP---VVQLANITVPeARLLVIQpydKTSIGDIEKAILKaDLG---LNPS 116 Bacillus anthracis
CCH58085      80 LNDAKQGNSNP-KIFNK--MKL--------QNgkiFTDVATISTKgANALLVTvfdPKDVNVIISSIFSaGLN---LNPQ 145 Tetrapisispora ...
CCF60105      66 LVELKQGNANP-NIFNA--LVM--------PSgkkFTDIAITSLRgKNSLLVTvfnPKDTKNVVSTILAaNLN---LTPE 131 Kazachstania af...
CCK68914      74 QNEVKQSTANV-KIFDQ--LKL--------ATgapFTDVASTSLKgKNALLVSvfnPLDVKKVVSCILAsGMN---LTPE 139 Kazachstania na...
Q7RB19       110 MKKLLE-NTLTvDFFNN--IVV--TKDKKkYK---LSDLSQVVIKsSKTIFFY---PYIISDIQKIIHSlKIKdntWNPT 178 Plasmodium yoel...
Q8IFQ7       110 IKKIFD-TCLQiDFFNN--ISI--LKDKKnIK---LCDVAQVVIKsSNLIYFY---PYTINDIQKIIHNlKLKdntWNPT 178 Plasmodium falc...
EDL45388     119 MKKIYE-NNLSvDFFNS--MVI--SKEKEtFS---LSDLAQVVVKsSRVIYFL---PYMASDAQRIIYHlKMKdntWNPT 187 malaria parasit...
Q4YNZ2        26 SYRFNL-NNVSsAMFENekVKIneRIYT-------INHICHIKKK-ENLFIITpydPYFVNFIYLHFTK---EyseLKFY 93  Plasmodium berghei
O96173       346 SYRFNL-NNVSnDMFENekVKIneRIYT-------VKHICHIKKK-ENLFTITpydPYFVNFLYQHFIK---EfdeLKFY 413 Plasmodium falc...
XP_001613016 270 syRFNL-NSISnTLFENekVKIndQLMT-------IKHMSHIRKK-ENLFIITpydPYYVNFIYNHFVK---EykeLKFY 337 malaria parasit...
4GFQ_A       117 -N-----DGTVIRIAFPALTEERRRDLVKVVKKYAEEAKV-----AVRNVRRDGNDDLKKLEKagE-----ITEDDLRGY 180 Bacillus anthracis
CCH58085     146 -Kip--nNNQQLKIALPPITTESRQKKCKELKEIFELYKNsskkeSLTAIRLNILKEMKNIQPr-T--------DEVKKA 213 Tetrapisispora ...
CCF60105     132 -Rlp--dNEQQLRIMLPPPTAESRLKVIKDSKELFESFKSsnskhSMGSIRRDILDKLKGIQm--D--------DFQKKC 198 Kazachstania af...
CCK68914     140 -QmegegNQQNLKISLPPRTRESRLQQCKDCKAVFEEYKNsglksSLGSVRRTFMSKLKTI-Kq-D--------DVVKRT 208 Kazachstania na...
Q7RB19       179 tPn----DGQYILLHIPPLTNEIKLKKKKEAKDILEKVKN-----DIRSIRHKIRDFI--GKNi-EgdewkIEE------ 240 Plasmodium yoel...
Q8IFQ7       179 vSn----DGQYVILQIQPLSEDVKMKKKKEAKDLFEKIKN-----DIRNVRYKIRDDI--IKNi-EgdqwkIVE------ 240 Plasmodium falc...
EDL45388     188 mSn----DGQQILLHIPPLTEDVKLKKRKEAKDLLEKIKN-----DLRNLRHRVRDDI--ARLl-QgeewkIVE------ 249 malaria parasit...
Q4YNZ2        94 iK-----DKS-ICAVIPPLSEHLKNEIKNKIKDKIEESKI-----TLRNVRKKFMNKL-------EkiknyIGKDIYFKQ 155 Plasmodium berghei
O96173       414 vK-----DKS-LYAIIPPISENLKNEIKMKIKRKIEDSKV-----TLRTVRKQMMDKL-------EkfknkIGKDIYFKQ 475 Plasmodium falc...
XP_001613016 338 vK-----DRS-LYAVVPPLSENLKNEIKIKIKEKVEDSKG-----TLRNVRKQMLAKL-------EklrgrIGKDIYFFQ 399 malaria parasit...
4GFQ_A       181 TEDIQKETDKYIAKVDEIAKNKEKEI 206 Bacillus anthracis
CCH58085     214 LQDVEKIHKEYGTKLQDIYKTIEKNM 239 Tetrapisispora blattae CBS 6284
CCF60105     199 IKDLETIHKDYMNQLKEQYKKFEStf 224 Kazachstania africana CBS 2517
CCK68914     209 EKDLEAMHKAYVNKLHEQFKQAEKSI 234 Kazachstania naganishii CBS 8797
Q7RB19       241 KNKLDNYIKNKVKNIESVYEKYTKny 266 Plasmodium yoelii yoelii
Q8IFQ7       241 RNKLDNYIKDKMKLIENVYEQSVKny 266 Plasmodium falciparum 3D7
EDL45388     250 RNKLDGYIKAKVKAVEAIyagyaae- 274 malaria parasite P. vivax
Q4YNZ2       156 KNHIQSLHDQTKKKIEKIFNEAi--- 178 Plasmodium berghei
O96173       476 KNYIQSIHDQTKKNIEKLFADtk--- 498 Plasmodium falciparum 3D7
XP_001613016 400 RNHIQSLHDQTRKRIEALLSElr--- 422 malaria parasite P. vivax
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap