4GFQ,1IS1


Conserved Protein Domain Family
RRF

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pfam01765: RRF 
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Ribosome recycling factor
The ribosome recycling factor (RRF / ribosome release factor) dissociates the ribosome from the mRNA after termination of translation, and is essential bacterial growth. Thus ribosomes are "recycled" and ready for another round of protein synthesis.
Statistics
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PSSM-Id: 334671
View PSSM: pfam01765
Aligned: 969 rows
Threshold Bit Score: 61.6885
Threshold Setting Gi: 569370224
Created: 18-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4GFQ_A        48 LATVRAG-RASASVLDK--VQVd-------YYGAP-TP-----VVQLANITVPeARLLVIQpydKTSIGDIEKAILKaDL 111 Bacillus anthracis
XP_009160233 152 lKTRDAG-RVTPQMVEGlpVEInvk--ghdAHGAP-PHkermkIGDLASVTPRgGRMMQVFcaeQAHVKPICSSILGsPY 227 Exophiala derma...
CCG83788      96 VKQLRAG-RQDPGKLKN--LLIp---------GED-TT-----LGSLAAVTQKnPKTFLVTvydPAHVKQISSAIASsGQ 157 Taphrina deform...
XP_007872313  68 SESLKMG-RSNLSLLDNlkIPIs------kKKSAL--------LKDLAHVSMQnNKSILLTiydNDNTKILVSTIRSsSL 132 Pneumocystis mu...
OAV92652     100 livnRVG-RLTPAFLDG--IKV--------MHDQQrLG-----MSSVAQVVVLdSNTLSVVpydPSFTKSIEQALYGsTL 163 Puccinia tritic...
XP_009267378 107 ilvnRVG-RVTPDLLDS--VRVe-------------IDkemfnLQSVASVSVKdGSSLLVSvfdSSMIRDVEKAIFAaNL 170 Wallemia ichthy...
XP_014566364 115 stvdRVG-RVNPSILSS--VKVelpididgRVEKRqQP-----LLDLALVKVKdAVTLLVSafdPDNLKEIERAIGIaNL 186 Mixia osmundae ...
XP_016270197 127 qivgRVD-TVKPSLLDN--VRVd------sPEGR--RP-----LNEFAAVSVKdGKELIVNcyePSFVKLVSDAIYAsPL 190 Rhodosporidium ...
KDE03740     129 avvgRVG-RVSPELLND--IKV--------EESGKrRP-----LAEFGTVSVKgGRDLVVHlfdESFMKAVSAALYAsPL 192 Microbotryum vi...
CCO33477      14 qmesRVSgRVVPSLLDP--VRVkl----kdAGGAA-VR-----LDQVSTVGVRdGNVLVVTlfdEVNMKDVEASIINaQI 81  Rhizoctonia sol...
4GFQ_A       112 -GLNPS-N---DGT---VIRIAFPALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDLKKLEKag----eITE-DDLR 178 Bacillus anthracis
XP_009160233 228 -SLVPQ-V---DANnplLVLVPVPPMTAETRAQARAEAKKVYDRATLEVRNARGDAQKRFRKMENq-----kLVIvDELH 297 Exophiala derma...
CCG83788     158 -NFNPQpV---PNNp-mQLTINIPSESAIALGQKVKLLNELGVKAKDAVRHARGNAIRAI-RASGg-----sI---DQMT 223 Taphrina deform...
XP_007872313 133 -GLNPV-IhplNPH---QYIIPLPPLTKENQKKKLIEISKLGENTEIIIRNIRTKNMKRLKKAKQqg----eLTE-DEIK 202 Pneumocystis mu...
OAV92652     164 -NLAPKlQ---ADG---SLSIAIPRLTIDTRKVLAKESGELCEQARAGIRNIRQAA----QKASRtdldsnlITK-DDFK 231 Puccinia tritic...
XP_009267378 171 -GLTPQkI---AEN---VLKCPVPKPAADTKSKLAKEAAGIAENARIALRLRRQALQKTI-SKQKd-----gKASgD-LR 236 Wallemia ichthy...
XP_014566364 187 -GLTPNrI---DKQ---TLSISVPKPTVESRQVLSRQAQTLCEHARTSIRTSRNLGMKEI----RsdqdrkvIGE-DESR 254 Mixia osmundae ...
XP_016270197 191 -GLAPLpE---GDT---KLRVPVPKADDDKRHQLVRDAQTLCEKTRQAIRKVRTDGQKDI----KrdtdqkiIGT-SEAR 258 Rhodosporidium ...
KDE03740     193 -SLTPQsH---SAS---SLLVPIPAPTWEKRKAMTRQASDACEAARIAVRNLRTRGQKEI----KqdlstssVSK-EEAR 260 Microbotryum vi...
CCO33477      82 pNMNPQrA---DTR---TLRIVVPKPTMEARQAVVANASRMAEDTKVKIRTSRESGMKELKK----------LGH-AKHS 144 Rhizoctonia sol...
4GFQ_A       179 GYTEDIQKETDKYIAKVDEIAKNKEKEI 206 Bacillus anthracis
XP_009160233 298 KAHKQMEEIVRKAGDECKKLYEGAVKAM 325 Exophiala dermatitidis NIH/UT8656
CCG83788     224 PIEKKVHALVTKHNTGIDKVVEDNRKAI 251 Taphrina deformans PYCC 5710
XP_007872313 203 LKEKEITKIISNANNEVKKIIESTKKSI 230 Pneumocystis murina B123
OAV92652     232 DNQKALDNLSKTYGKLVDGIETKSKavl 259 Puccinia triticina 1-1 BBBD Race 1
XP_009267378 237 TIDKMMDEATIAHSKAVDDLVHKAQAAL 264 Wallemia ichthyophaga EXF-994
XP_014566364 255 KQGKKLDELSRRHTKEVDDIFDAASKII 282 Mixia osmundae IAM 14324
XP_016270197 259 QEGKKLDDATKKKTAEVDRIFEDIKKIV 286 Rhodosporidium toruloides NP11
KDE03740     261 SDGKNLDAATKKRTDEIDGIFAEAKKVL 288 Microbotryum violaceum p1A1 Lamole
CCO33477     145 KFADELQKSTDKHTKDIDALVAKLKKSI 172 Rhizoctonia solani AG-1 IB
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