2OS3,1LME,1V3Y


Conserved Protein Domain Family
Pep_deformylase

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pfam01327: Pep_deformylase 
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Polypeptide deformylase
Statistics
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PSSM-Id: 307477
View PSSM: pfam01327
Aligned: 83 rows
Threshold Bit Score: 120.377
Threshold Setting Gi: 124459384
Created: 13-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2OS3_A        16 DDIIREGNP---TLRAVAKEVS-LPl--CDeDILLGEKM--MQFLKHS-QdpvmaeklglraGVG-LAAPQIDVSKRIIA 85  Streptococcus p...
Q30SY4        22 KEIVTYPTP---PSVQYATDVRvFN----EeIESLIEDL--KDTIKAN--------------SLEaLAAFQIGSYFNIVV 78  Sulfurimonas de...
Q54JC1         8 KNIVKVGNK---LLREKALPWSkEElndVRrVEKLLEKM--YKEMKDC-T------------GTG-IAAPQIGVNKQLFL 68  Dictyostelium d...
A0C0K9        12 FKVLPISHE---ILRKKIFEHYnFTnkeEDtLSTMIDTLrlYNKLHSI-E------------ALA-LAAPQVGWEKRLFV 74  Paramecium tetr...
A0CRA8         2 ANIIVFGDKlsnALFSKCIYYGaFN----KrFYSKVNQM----KLAAVdK------------RIRiLAANQVGLEQNLFI 61  Paramecium tetr...
Q24F07        79 ynlidfQHPdftNLESKCLPVQgFT---QT-LKSEILNL--KYHAEVS-G------------RVN-LAANQIGIPKRFIV 138 Tetrahymena the...
A0DKG8        27 LLFATGNDD---CLFYSADLVMnLSsrkKKdMNNLLFTMqtLE--------------------IPyLSANQVGVEDRYFG 83  Paramecium tetr...
Q83AK6         2 KIVTTDSENk-aVLYKVASEVE------IPlTKTTKEKIeaMRIFYKSfQ------------GKAgFAVPQVGLSERIIL 62  Coxiella burnet...
WP_011948566   4 KPILLLGDE---ILYRISEEIQkSN---LDkAKQVINDL--HDTIVSF-Knry-------gfGRA-IAAPQIGESVRIIY 66  Clostridium bot...
WP_011979883   3 QKLVIYPDD---RMNCTSTDVRsFN----QtLWDVLEDM--RDTMLAH--------------DIKaMAAMQIAYPYNIIL 59  Sulfurovum sp. ...
2OS3_A        86 ---VLVPNLPDKEGNPpkea-yswqEVLYNPKIvs--------------------------------------------- 116 Streptococcus p...
Q30SY4        79 ---VAQDGGEFL--------------ELINPRI----------------------------------------------- 94  Sulfurimonas de...
Q54JC1        69 ---LELPSQEGLNCPNfp------lTAFFNPKIklidqdvtkpsrrtitdfkkflhgsekllnlsqyktkfqteestlpt 139 Dictyostelium d...
A0C0K9        75 cadLELQQRKKAKYIQk-------vDVYLNPEIi---------------------------------------------- 101 Paramecium tetr...
A0CRA8        62 ---MLPQSSKMIPSEY---------KVIINPKIl---------------------------------------------- 83  Paramecium tetr...
Q24F07       139 ---LAKPDYLYKRVWVndnldiqhlHALVNPRIl---------------------------------------------- 169 Tetrahymena the...
A0DKG8        84 ---IMFQKQNFKWSLIeekn--lekLLCVNPLVv---------------------------------------------- 112 Paramecium tetr...
Q83AK6        63 ---VEQHLFDTTMAEEtd-----epTILVNPSWr---------------------------------------------- 88  Coxiella burnet...
WP_011948566  67 ---MHLGDKTH---------------YFINPILe---------------------------------------------- 82  Clostridium bot...
WP_011979883  60 ---IKEGEEYH---------------EYINPRI----------------------------------------------- 74  Sulfurovum sp. ...
2OS3_A       117 hSVQDAALSDGEGCLSVD-RvVEGYVVRHARVTVDYYDKEGQQHRI-KLKG-------YNAIVVQHEIDHINGVLFYDRI 187 Streptococcus p...
Q30SY4        95 -INPHGRVTTIEKTAYFP-N-LSAEVTRYETISLVYQDRELQQHSL-KADG-------AFSILLQRKVDYTFGSTFLNKL 163 Sulfurimonas de...
Q54JC1       140 iPTENNTITMLESCLSVP-N-IFAHVQRSKRCIITFLDITGKERII-EADG-------ILAACFQHEYDHLLGKIFIDRI 209 Dictyostelium d...
A0C0K9       102 -KKSNDLIVSKENCLSIPpN-QIACVMRSNKITMKYYNLLGIEMVV-EAEG-------LQACIYQHEIDHLDG------I 165 Paramecium tetr...
A0CRA8        84 -KISNEVIENTEESISFP-Q-FKAKVNRYKTIFVSYDDKKGKTVEE-ELKG-------LESIWYQQAIDQVMGIPCISWI 152 Paramecium tetr...
Q24F07       170 -DKDKFMEYDWEQTACFP-T-VRFRRLRYHHILVQYLNEQMEQVEV-EMNG-------WESRLFQQSLDHLNGIIPFDEV 238 Tetrahymena the...
A0DKG8       113 -SVSETTSIDWETNICFP-F-IRSQIERYDRIRLHFQTLEDEQEFE--FEG-------FNARVVQQAIDSLNGYQIIDPR 180 Paramecium tetr...
Q83AK6        89 -PISDKKEWDIEGCLSVP-G-KVGVVERYVHVELTAWLYHSDTEAL--SKIkreyhreYSSVLWQHEIDHLEGKIYVDKA 163 Coxiella burnet...
WP_011948566  83 -FIGEDTFHLWDDCMSFP-G-LEVYVERHKKCKVTYKNLSWEDCEM-YLEG-------DLSELFQHEYDHLDGILAVQRA 151 Clostridium bot...
WP_011979883  75 -IKNEDLFDSEESSIHYP-D-VTVTIPRYGKIKLVYEDRNGQVHYEdIEDR-------ELAATLQRKIDITFGGNILDKV 144 Sulfurovum sp. ...
2OS3_A       188 NAKN 191 Streptococcus pyogenes M1 GAS
Q30SY4       164 NKVE 167 Sulfurimonas denitrificans DSM 1251
Q54JC1       210 DKSE 213 Dictyostelium discoideum AX4
A0C0K9       166 NALE 169 Paramecium tetraurelia
A0CRA8       153 ASQG 156 Paramecium tetraurelia
Q24F07       239 KNml 242 Tetrahymena thermophila SB210
A0DKG8       181 IHCG 184 Paramecium tetraurelia
Q83AK6       164 KLLL 167 Coxiella burnetii RSA 493
WP_011948566 152 KDLK 155 Clostridium botulinum
WP_011979883 145 DKNT 148 Sulfurovum sp. NBC37-1
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