3RHN,4ZGL,3N1S


Conserved Protein Domain Family
HIT

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pfam01230: HIT 
Click on image for an interactive view with Cn3D
HIT domain
Statistics
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PSSM-Id: 334445
View PSSM: pfam01230
Aligned: 28 rows
Threshold Bit Score: 82.7281
Threshold Setting Gi: 59799590
Created: 16-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3RHN_A        13 RKEIPAKIIFEDDQCLAFHDISPQAPTHFLVIPKK-HISQISaaeDAD-------ESLLGHLMIVGKKCAADLGLKkg-- 82
gi 81784361   10 TAQNEDVLLQTPNLRVIAVHNDSGSPAFCRVIWRK-HIAEMT---DLS-------AAERGELMEMVYKVEAAMRQVf--- 75
gi 81544614   14 QLQKDTDVIGHFPLCVALLHKDSAVPWVILVPQRA-DLRELH---HLP-------MDEQQQFLVESQLVCQTLETLf--- 79
gi 81541664   74 RLEQDTLLLGDFPLSRLLLMNDARYPWFILVPRRE-DVTELF---QLD-------VDDRQALWREATLLAEVLKDTf--- 139
gi 81778199   14 RLEADSEQVMWLGLCELRVMNDRRWPWLVLVPQRP-GAEEIH---DMT-------PLDQAMLTFETNMVAQALKKVs--- 79
gi 158931125  12 VT---EQVFYKSKYTYALVNLKPIVPGHVLIVPLRtTVLNLS---DLT-------MPESQDYFKTLQLIHRFIKWQykad 78
gi 1706794    11 KP---SVVFLKTELSFALVNRKPVVPGHVLVCPLR-PVERFH---DLR-------PDEVADLFQTTQRVGTVVEKHfhgt 76
gi 1703339    12 VG---SQVFYRTKLSAAFVNLKPILPGHVLVIPQR-AVPRLK---DLT-------PSELTDLFTSVRKVQQVIEKVfsas 77
gi 74582576   44 SPESYKNVIYYDDDVVLVRDMFPKSKMHLLLMTRDpHLTHVH---PLE---------IMMKHRSLVEKLVSYVQGDlsgl 111
gi 59799590   15 ETVNDDTVTYFDDKVSIIRDSFPKSECHLLILPRTmQLSRSH---PTKvidakfkNEFESYVNSAIDHIFRHFQEKfrik 91
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
3RHN_A        83 --------------------yrMVVNEGSDGGQSVYHVHLHVLGGRQM 110
gi 81784361   76 ---------------------rPAKINLASLGNVVPHLHWHIIARFEN 102
gi 81544614   80 ---------------------sPDKLNLGALGNMVPQLHIHHIARFTH 106
gi 81541664  140 ---------------------rADKMNVANLGNVVSQLHMHVIVRRRG 166
gi 81778199   80 ---------------------gCTKINTGALGNIVRQLHIHIVARSEG 106
gi 158931125  79 -------------------sinVAIQDGPEAGQSVPHLHTHIIPRYKI 107
gi 1706794    77 -------------------sltFSMQDGPEAGQTVKHVHVHVLPRKAG 105
gi 1703339    78 -------------------asnIGIQDGVDAGQTVPHVHVHIIPRKKA 106
gi 74582576  112 ifdearnc---lsqqltnealcNYIKVGFHAGPSMNNLHLHIMTLDHV 156
gi 59799590   92 ksdddkdpcwddilkdknkfvrNFVQVGIHSVPSMANLHIHVISKDFH 139
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