1B4R


Conserved Protein Domain Family
PKD

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pfam00801: PKD 
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PKD domain
This domain was first identified in the Polycystic kidney disease protein PKD1. This domain has been predicted to contain an Ig-like fold.
Statistics
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PSSM-Id: 334260
View PSSM: pfam00801
Aligned: 43 rows
Threshold Bit Score: 34.2813
Threshold Setting Gi: 292495072
Created: 14-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1B4R_A          3 LVGPhg------pLASGQLAAFHIAAp---LPVTATRWDFGDg----SAEVDAAGPAASHRYVLPGRYHVTAVLALGAGS 69
gi 292495072 1807 IRASepg---gsfVAAGSSVPFWGQLa--tGTNVSWCWAVPG-------GSSKRGPHVTMVFPDAGTFSIRLNASNAVSW 1874
gi 292495072 1553 VNASrt------vVPLNGSVSFSTSLe--aGSDVRYSWVLCD-----RCTPIPGGPTISYTFRSVGTFNIIVTAENEVGS 1619
gi 341941262 1720 LSASpn------pAAVNMSLTLCAELa--gGSGVVYTWYLEE-----GLSWKTSMPSTTHTFAAPGLHLVRVTAENQLGS 1786
gi 292495072 1723 VAASpn------pAAVNTSVTLSAELa--gGSGVVYTWSLEE-----GLSWETSEPFTTHSFPTPGLHLVTMTAGNPLGS 1789
gi 341941262 1631 VAGGdng----ccFPTNYTLQLQAAVr--dGTNISYSWTAQQeg--sLITLFGSGKCFSLTSLKASTYYVHLRATNMLGS 1702
gi 292495072 1637 VVGGgr------yFPTNHTVQLQAVVr--dGTNVSYSWTAWRd---rGPALAGSGKGFSLTVLEAGTYHVQLRATNMLGS 1705
gi 292495072 1976 VPNCce-----pgIATGTERNFTARVq--rGSRVAYAWYFSLqkvqgDSLVILSGRDVTYTPVAAGLLEIQVRAFNALGS 2048
gi 294862437  730 LSANatgfeggsmVCCTLHINGAASDp--dGDNLTYSWQVISg---nTVVASGSSSSASIHVSNQRGYEVSMTVSDGRGG 804
gi 81544151   842 pQASan------yIHLGRWVTMWSTStdsdGRIVDTEWTLPN-------GKIKRGRMFTAIFPSYGHHDVQLKVMDDRGA 908

                  .
1B4R_A         70 A 70
gi 292495072 1875 V 1875
gi 292495072 1620 A 1620
gi 341941262 1787 V 1787
gi 292495072 1790 A 1790
gi 341941262 1703 A 1703
gi 292495072 1706 A 1706
gi 292495072 2049 E 2049
gi 294862437  805 V 805
gi 81544151   909 V 909
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