3BN6,4MO3


Conserved Protein Domain Family
F5_F8_type_C

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pfam00754: F5_F8_type_C 
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F5/8 type C domain
This domain is also known as the discoidin (DS) domain family.
Statistics
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PSSM-Id: 334238
View PSSM: pfam00754
Aligned: 186 rows
Threshold Bit Score: 39.7404
Threshold Setting Gi: 81586620
Created: 15-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3BN6_A   16 QITASSYyktwglsAFSWf---PYYARLD---N--QG--KfN-----AWT----AQTNSASEWLQIDLGSQKRVTGIITQ 76   cattle
Q8CKA9   32 QIVAVTAsgh--dsEKGH----VPANIAD---G--DV--K-T-----RWA----ASGD---SWIQLELDKAQSIENILIV 85   Yersinia pestis
Q8G4P3  800 QGAQVSA-------DGFTngneKPEFAVD---G--DV--K-T-----KWC----VTGPAP-HELVVDLGAPKTVSQVDIS 854  Bifidobacterium longum
Q8XM72  701 SVQTSAE-------GAAE----PGLKAVD---GkvDN--N-S-----KWC----AAGAKD-GWLTIDLGEPKNIQRWVVK 753  Clostridium perfrin...
Q9CFI5  212 QVDSFTN--------ESE----SGPKAVD---G--KL--N-T-----KWC----AVGPGK-HNITIDIGKSEKINQVLID 261  Lactococcus lactis ...
Q9KER4  757 KATASGQc------ASSE----GPDKAVD---G--NVsdN-S-----KWC----AIGAN--QWLQVDLGEVYTIAKFVLK 809  Bacillus halodurans
Q8XK80  781 AEPTITEni---gtHENY----TIDKALD---G--NM--D-Tk----YWS----NKPSDSGHNIQIDLGNVMPLYDINTY 837  Clostridium perfrin...
P26831  809 SLIRSESw-----qVYEG----NEANLLD---G--DD--N-Tg----VWYktlnGDTSLAGEFIGLDLGKEIKLDGIRFV 867  Clostridium perfrin...
Q8XKW3  647 DTTKLTLrpytnmsPLYWg---HVQNIAD---G------D-NtryscMWI----RNSAKEGDYVAVELNEVTKVNSITFE 709  Clostridium perfrin...
Q8XM09  660 SEWFISE--------ETH----VPNYMFDdkdN------T-G-----FWS----AAPVQKDEFIGFDLGEAEEIKDIYLL 711  Clostridium perfrin...
3BN6_A   77 GARDFG---HiQYVAAYRVAYGDD-GvTWTEYKDpgaseskifPGNMDNNSHKKNIFEt-PFQArFVRIQPVA--WH--N 147  cattle
Q8CKA9   86 PFKA-----T-ERKLKFAIAYSTD-GkTWQSLAEgl------eTITAD---KKGEKLTfsPINAkYIKLETFG---TdvN 146  Yersinia pestis
Q8G4P3  855 HAQAGGedaS-MNTQEYAIEVSED-GtEYTQVALv--------KGNTE--GATSNAFA--PVNArYVKLVVNKp-TQgsD 919  Bifidobacterium longum
Q8XM72  754 HAEAGGeakD-MNTKDFALEVSYDgGqTYQEVDVv--------TGNED--AITDRNLEn-PIVAqHLRLRIDNsgSSpwA 821  Clostridium perfrin...
Q9CFI5  262 HAQKGGespD-MNTSDYTIEISKD-NqNWTEVVNvk------kNKLGE----TKDSFK--QTEArYVRITATKptQGadT 327  Lactococcus lactis ...
Q9KER4  810 HAEAGGepaA-FNTKAYTIETSVN-GqSWKPVVE---------VVNNTk-----------ATSE---------------H 852  Bacillus halodurans
Q8XK80  838 FGA------N-DFMRNSEYMISED-GvNWTSLGA---------LAYNSQDGKMVASANaeGKMArYIKIQSNG---HnyG 897  Clostridium perfrin...
P26831  868 IGKNGGg-sS-DKWNKFKLEYSLD-NeSWTTIKEyd------kTGAPAGKDVIEESFEt-PISAkYIRLTNMEn----iN 933  Clostridium perfrin...
Q8XKW3  710 QGQDE----G-DAFNYGKFQYSMD-GeNWIDVDG---------VDYGP--KMHKIVVEglDITAkYLRFIPTK---EilN 769  Clostridium perfrin...
Q8XM09  712 MGRNNNd--T-DVLTNGVIEYSLD-GeNWTELEV--------------NKGERELLVEt-GIKArFIRYRALS---DseN 769  Clostridium perfrin...
3BN6_A  148 RITLRVeL 155  cattle
Q8CKA9  147 KWSAINeV 154  Yersinia pestis
Q8G4P3  920 TAARIYeM 927  Bifidobacterium longum
Q8XM72  822 AIRIYE-F 828  Clostridium perfringens
Q9CFI5  328 AVRLYE-I 334  Lactococcus lactis subsp. lactis
Q9KER4  853 SIGTRTvC 860  Bacillus halodurans
Q8XK80  898 CWVEIYeI 905  Clostridium perfringens
P26831  934 KWLTFSeF 941  Clostridium perfringens str. 13
Q8XKW3  770 NWIAVReF 777  Clostridium perfringens
Q8XM09  770 KLYVRdfk 777  Clostridium perfringens
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