1GZ0,4X3M,2HA8,3ILK,3KTY


Conserved Protein Domain Family
SpoU_methylase

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pfam00588: SpoU_methylase 
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SpoU rRNA Methylase family
This family of proteins probably use S-AdoMet.
Statistics
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Aligned: 129 rows
Threshold Bit Score: 90.2733
Threshold Setting Gi: 81736103
Created: 23-Apr-2019
Updated: 18-Jul-2019
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1GZ0_A   105 PFLLIlDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAqL-NATAKKVaCGAAESVPl-IRVTNLARTXRXLQEEni--w 180 Escherichia coli
Q58871     4 MISVIlVNPKYSGNVGSIARVMMNFGFEELRIVGDKSIi--NNEAYMMaVHAREILDnaKFYNTFDEAIGDLDFV----- 76  Methanocaldococcus ...
Q5JGC0     1 mISVVlVEPEGPANIGMIARTMKNFGFSRLVLINPNL----TEESYAYaVHARDVLEnaLILDSFEKALELFDFT----- 71  Thermococcus kodaka...
O27877    10 NISVVfVEPETPGNIGFLARAMKNFGLRTLILINPCEL---EDEAYYQaMHARDIVEgaLIYRDLSEMIDSLEPDflv-g 85  Methanothermobacter...
Q8TXY9     2 DVRVVlVEPKYDGNIGHVARVMKNFGVKELFLVRPRSEl--GEVAIARaMHALDLLEnaVIVNTLEEAIEDVEAAiatta 79  Methanopyrus kandleri
AAK41042   1 MIRVVlVEPEGEYNIGFVARLCKNFLVDELYIVNPRAN---ISEAFRFsAGGREILEkaKIVNTFDKAINDVDIKia--- 74  Saccharolobus solfa...
Q7U8A3     2 TVVVVlVEPAGPLNIGSVARLCANFGVDALRLVNPRCE-VlCDDALRMaVHATPLLRqaTIHPDLEAAIGDCSRV----- 75  Synechococcus sp. W...
Q7VBF1     9 PLKIIlVEPLGEINLGSIARLCENFGVDELRLVSPRCd-PmNIETQKMaVHGKRFLKnaCIYSNLLDAVNDCVRVva--- 84  Prochlorococcus mar...
Q7V131     7 NLNVVlVEPNGPLNVGSIARLCSNFDVNELRIVSPKCd-IfSLEAKKMaLKGYRYIDncKIFNSIEQAIFDCDLVia--- 82  Prochlorococcus mar...
Q8YNM2     5 GVRIVlVEPSGPLNVGAIARVMKNFGLAHLVLVSPQCd-PlSEDAMRMaVHAKEILEsaITVPTLPAALHGCVRAia--- 80  Nostoc sp. PCC 7120
1GZ0_A   181 iVGTAG----EAD------HtLY----QS----------KXT-------GRLALVXGAEGEGXRRltREHCDeLISIPXa 229 Escherichia coli
Q58871    77 -IATSGa--rGGDrnlkrvP-IT----PK----------ELAdkilevkGNIGIVFGREDDGLRNeeIDKCDlLVSIPTs 138 Methanocaldococcus ...
Q5JGC0    72 -VGTTGk---PGK------R-FIphraPLmpwelvglikDYP-------GEVGIFFGRESIGLKNeeLDAMDvTLTIPTs 133 Thermococcus kodaka...
O27877    86 tTGVPG----GSY------N-VD----RIpl------rpSQLadairpsSGTFILFGREGDGLSNeeIGLCDmVVSVPTs 144 Methanothermobacter...
Q8TXY9    80 vLASTP----ARN------P-MM----PWev------reAFSd-----yEKIAVVFGPEDRGLRTweVELCDaTLHIPTs 133 Methanopyrus kandleri
AAK41042  75 tSSIADn---NGD------I-LR----KSi--------rPWEilpliqgKKIALIFGRESVGLTReeIFKCDfLLYIPAn 132 Saccharolobus solfa...
Q7U8A3    76 -IATCGrldhGGI------P-LQ----TPdt------aiNWLla---gdPPHALVFGREDRGLTNdeLRLCQrVLTLHSq 134 Synechococcus sp. W...
Q7VBF1    85 tCGRIDh---GDI------P-LH----TSkn------alQWLlet-npkDPIAIIFGREDRGLSNseLQIAQkIITLKTs 143 Prochlorococcus mar...
Q7V131    83 tFGRIDl--sNDI------E-CE----SPed------isKWIssf-veiNNLGILFGREDRGLSNneLLFAHkILNIKTs 142 Prochlorococcus mar...
Q8YNM2    81 tSGRDNd---WGL------T-LE----TPri------alPWLlee--tgQPSALIFGREDRGLSNeeLIYAQrFIRIPTs 138 Nostoc sp. PCC 7120
1GZ0_A   230 GSVSSLNVSVATGICLF 246 Escherichia coli
Q58871   139 EKYPIMNLSHAVAVILY 155 Methanocaldococcus jannaschii DSM 2661
Q5JGC0   134 EEYPVMNLAQAAAVVLY 150 Thermococcus kodakarensis KOD1
O27877   145 EEYPIMNITHAAAIIFY 161 Methanothermobacter thermautotrophicus str. Delta H
Q8TXY9   134 EEYRSMNLSHSVAVVLY 150 Methanopyrus kandleri
AAK41042 133 PSYPVLNLSHAVGIVLY 149 Saccharolobus solfataricus P2
Q7U8A3   135 AAYPSLNLSHAVAVVLH 151 Synechococcus sp. WH 8102
Q7VBF1   144 EKYPSLNLSHAVAIVLH 160 Prochlorococcus marinus
Q7V131   143 QNYPSLNLSHAVSIILY 159 Prochlorococcus marinus subsp. pastoris str. CCMP1986
Q8YNM2   139 PDYLSLNLASAVGICCY 155 Nostoc sp. PCC 7120
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