1WMH,1OEY,4Y5O,2NPT,2G4S,1WI0


Conserved Protein Domain Family
PB1

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pfam00564: PB1 
Click on image for an interactive view with Cn3D
PB1 domain
Statistics
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PSSM-Id: 278962
View PSSM: pfam00564
Aligned: 47 rows
Threshold Bit Score: 48.0423
Threshold Setting Gi: 20141691
Created: 12-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1WMH_B         6 IVEVKSKFDAEFRRf--aLPRASVS-GFQEFSRLLRAVHQIP----GLDVLLGYTDAHGDLLPLTNDDSLHRALASGPP- 77
2NPT_B        20 DVRVKFEHRGEKRI----LQFPRPV-KLEDLRSKAKIAFGQ-------SMDLHYTNNEL-VIPLTTQDDLDKAVELLDRs 86
2G4S_A         5 QVTLNVTFKNEIQSf--lVSDPENT-TWADIEAMVKVSFDL------NTIQIKYLDEENEEVSINSQGEYEEALKMAVKq 75
gi 20141691    3 EKLLKITYQGAGPQkkinAYLRMPSqNYTILRREIELYLFQErqlpKCDVRTFWIDADKDEIEIVNQNDYEIFLAKC--- 79
gi 68067736   15 RVRLKAHYGGDIFI----TSVDAAT-TFEELCEEVRDMCRLHq---QHPLTLKWVDSEGDPCTVSSQMELEEAFRLARQc 86
gi 51701751   12 DIKLKTRFQGQVVV----LYARPPL-ILDDFFALLKDACKQHk---KQDITVKWIDEDGDPISIDSQMELDEAVRCLNSs 83
1WI0_A        18 VIRIKIPNSGAVDWt---VHSGPQL-LFRDVLDVIGQVLPEA-----TTTAFEYEDEDGDRITVRSDEEMKAMLSYYys- 87
gi 229891215  15 FIRIKCILGDDIRI----IKFNSNI-SYGGLMNQLEQDFQC------PISIHQYEDYEGDKVTVKSKDDIMEALTMYFEl 83
gi 75318366  317 TRTIKLVHGDDIRW----AQLPLDS-TVRLVRDVIRDRFPAL-----RGFLIKYRDTEGDLVTITTTDELRLAASTHDkl 386
gi 75098502  290 WRPLKFVYDHDIRL----GQMPVNC-RFKELREIVSSRFPSS-----KAVLIKYKDNDGDLVTITSTAELKLAESAADCi 359
                         90       100
                 ....*....|....*....|...
1WMH_B        78 --------------PLRLLVQKR 86
2NPT_B        87 ih----------mkSLKILLVIN 99
2G4S_A        76 g------------nQLQMQVHEG 86
gi 20141691   80 --------------ESNMHVQVA 88
gi 68067736   87 r-----------deGLIIHVFPS 98
gi 51701751   84 q-----------eaELNIHVFVG 95
1WI0_A        88 -------------tVMEQQVNGQ 97
gi 229891215  84 kaln-----ptkiiSTKFFLKQL 101
gi 75318366  387 -------------gSLRLYIAEV 396
gi 75098502  360 ltkepdtdksdsvgMLRLHVVDv 382
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