3J21


Conserved Protein Domain Family
KOW

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pfam00467: KOW 
Click on image for an interactive view with Cn3D
KOW motif
This family has been extended to coincide with ref. The KOW (Kyprides, Ouzounis, Woese) motif is found in a variety of ribosomal proteins and NusG.
Statistics
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PSSM-Id: 334094
View PSSM: pfam00467
Aligned: 172 rows
Threshold Bit Score: 26.1957
Threshold Setting Gi: 3122645
Created: 14-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3J21_U   48 VGDKVRIMRGDYKGHEGKVVEVDLKR--YRIYVE 79   Pyrococcus furiosus DSM 3638
O80770  263 RDSWVRMKLGIYKGDLAQVVDVDNVR--KRVTVK 294  thale cress
O00267  275 PKSWVRLKRGIYKDDIAQVDYVEPSQ--NTISLK 306  human
Q9V460  312 VKQWVRLKRGLYKDDIAQVDYVDLAQ--NQVHLK 343  fruit fly
P27692  384 EGSYVRIKRGIYKGDLAMVDQISENN--LEVMLK 415  Saccharomyces cerevisiae S288c
O13936  336 PGAYVRIRRGKYAGDLAQVDNLSENGltARVRIV 369  Schizosaccharomyces pombe 972h-
O00267  706 IGQTVRISQGPYKGYIGVVKDATEST--ARVELH 737  human
Q9V460  742 LGKTIKISGGPYKGAVGIVKDATEST--ARVELH 773  fruit fly
Q21338  732 IGKNVRIIKGPMKGHFGIVRDATEDT--VRVELH 763  Caenorhabditis elegans
O13936  730 IGATVRIRRGPMKGLLGVIKDTTDAN--ARVELH 761  Schizosaccharomyces pombe 972h-
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