3IU5


Conserved Protein Domain Family
Bromodomain

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pfam00439: Bromodomain 
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Bromodomain
Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine.
Statistics
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Aligned: 45 rows
Threshold Bit Score: 48.0845
Threshold Setting Gi: 156847669
Created: 22-Apr-2019
Updated: 18-Jul-2019
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3IU5_A         14 YNTIR----DYKDEQGrlLCELFirapKRRNQPDYYE-------VVSQPIDLMKIQQKL---KMEEYDDVNLLTADFQLL 79   human
Q6CY60        209 LEAAS----NNNLDDTlnICQPFlelvDKDEYPEYEE-------VIRLPNSLNLVKNNL---ELGYYHKIYDFITDVNLT 274  Kluyveromyces...
Q86U86        786 FVSVM----SHQDDEG--RCYSDslaeIPAVDPNFPN---------KPPLTFDIIRKNV---ENNRYRRLDLFQEHMFEV 847  human
O74350        194 MLPML----DNISNHR--FGAPFshpvNRKEAPDYDS-------LVYKPQDLRTLKNMI---KEGNITEVDELYREVLRI 257  Schizosacchar...
XP_310403     855 ILAVY----SKIASSK--NAAAFqkplPEDQTAH----------LIYRPMDLPQIKRNI---ENGNIRTTAEFQRDLLLM 915  Anopheles gam...
XP_002630769  688 LMKRW----DTIERHP--CAEPFre-pVPECEEEYGL-------GIHEKVDLSAIRRDI---DTGVVDGLTLFLLRTYRM 750  Caenorhabditi...
XP_001304005   13 MDNLL----AHPISNY--FKFEVv--pGVDADVDYTD-------YVKNPQDLNTIKKRL---EGNQYNNLYSWMQDVEIV 74   Trichomonas v...
XP_001704393   25 IRTVL----RDSMKPL--DSFTLf---QNPVVVDYPDlkqqyeaVIEFPCSLSEIKQRLsnrSGNTYTHIGDVFCDLCLT 95   Giardia lambl...
XP_011391866  278 YSAVLdcirNHIDATGrrPAEHLeqcpDPEVDPDFYE-------KVEKPTSLSAISQRI---QEGEYPKATDFEMDMLQL 347  Ustilago mayd...
XP_001321340    9 LLQEM----DTMMKDE--MYVPFnd-fLGYVSEEYHQ-------KIARPIDLNTVKANL---ENRQYHRYIDWYHDMELV 71   Trichomonas v...
3IU5_A         80 FNNAKSYYK-PDSPEYK-AACK 99   human
Q6CY60        275 FQNALVFND-EDTTIYS-DALK 294  Kluyveromyces lactis
Q86U86        848 LERARRMNR-TDSEIYE-DAVE 867  human
O74350        258 FANCKMYNG-SDPANAM-SIWG 277  Schizosaccharomyces pombe 972h-
XP_310403     916 CTNAIMLNR-NDLCSPA-AASL 935  Anopheles gambiae str. PEST
XP_002630769  751 FSNAVMFNG-YDHDVAL-QAKD 770  Caenorhabditis briggsae
XP_001304005   75 WANAERYNG-SGSDMGI-AARE 94   Trichomonas vaginalis G3
XP_001704393   96 ISNAMTFNK-SNTVILE-QVRI 115  Giardia lamblia ATCC 50803
XP_011391866  348 FENARRLHP-IGTQMYG-DAVV 367  Ustilago maydis 521
XP_001321340   72 FKNTIEFYKnEQFSPYPpMATY 93   Trichomonas vaginalis G3
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